G47184


Basic Information

Item Value
gene id G47184
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 45268054 ~ 45268386 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU58832
tgagaaagacctaggagtctatgtggactcctcactttctccatccaaacagtgtggggaagcaataaaaaaggcaaacacaatgctagggtatattgtcaaaagtgtagaattgagaacaagggcagtgatgttcagactgtacaatgcactagttagagctcatctggatactgtgtgcagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaaagtcctactgagagactgaggaactgaaccttttcaccctggaacagaggagactacgtggg

Function

GO:

id name namespace
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58832 True 333 lncRNA 0.46 1 45268054 45268386

Neighbor

gene id symbol gene type direction distance location
AMCG00013840 LOC104957825,LOC107725284 coding upstream 327893 44933300 ~ 44940161 (+)
AMCG00013839 NA coding upstream 348793 44901032 ~ 44919261 (+)
AMCG00013837 NA coding upstream 571283 44695779 ~ 44696771 (+)
AMCG00013834 NA coding upstream 606416 44635479 ~ 44661638 (+)
AMCG00013833 kcnd3,LOC101073956,LOC102776651,LOC102303593 coding upstream 737227 44529718 ~ 44530827 (+)
AMCG00013841 LOC101476397 coding downstream 78221 45346607 ~ 45353929 (+)
AMCG00013849 kif21b coding downstream 151527 45419913 ~ 45431617 (+)
AMCG00013848 LOC106582687 coding downstream 174700 45443086 ~ 45456185 (+)
AMCG00013851 LOC101073987,LOC107714485,LOC106582685,LOC105898132 coding downstream 222351 45490737 ~ 45494667 (+)
AMCG00013850 cpne5b,LOC107714485,LOC105027122,LOC108280970,LOC108436414 coding downstream 283587 45551973 ~ 45569316 (+)
G47158 NA non-coding upstream 304582 44961609 ~ 44963472 (+)
G47110 NA non-coding upstream 938507 44329293 ~ 44329547 (+)
G47107 NA non-coding upstream 969390 44298269 ~ 44298664 (+)
G47106 NA non-coding upstream 976258 44289057 ~ 44291796 (+)
G47080 NA non-coding upstream 1044653 44222408 ~ 44223401 (+)
G47186 NA non-coding downstream 11368 45279754 ~ 45281095 (+)
G47188 NA non-coding downstream 15006 45283392 ~ 45283600 (+)
G47189 NA non-coding downstream 15454 45283840 ~ 45284159 (+)
G47190 NA non-coding downstream 18130 45286516 ~ 45286853 (+)
G47192 NA non-coding downstream 22887 45291273 ~ 45292900 (+)
AMCG00013838 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108264952,LOC108438565,LOC102786421,LOC100700110 other upstream 172385 45034772 ~ 45095669 (+)
G46945 NA other upstream 1827356 43438492 ~ 43440698 (+)
G46862 NA other upstream 2178411 43087289 ~ 43089643 (+)
G46840 LOC107711852,LOC107679810,LOC107594520,LOC108425079,LOC108265838 other upstream 2223618 43039984 ~ 43044436 (+)
AMCG00013777 NA other upstream 2606210 42650190 ~ 42661844 (+)
G47206 NA other downstream 58272 45326658 ~ 45360882 (+)
AMCG00013872 NA other downstream 547986 45816372 ~ 45823228 (+)
G47398 NA other downstream 666273 45934659 ~ 45941906 (+)
AMCG00013879 dennd2d other downstream 675185 45943571 ~ 45959194 (+)
AMCG00013919 LOC102792503,LOC106583503,LOC106565096 other downstream 1768709 47037095 ~ 47073708 (+)

Expression


Co-expression Network