Gene
RNA
| Item | Value |
|---|---|
| gene id | G47762 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 47232054 ~ 47248989 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59601 | True | 341 | lncRNA | 0.53 | 2 | 47232054 | 47248989 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013924 | etnk2,LOC106565623,LOC107694884 | coding | upstream | 99878 | 47123708 ~ 47132176 (+) |
| AMCG00013917 | NA | coding | upstream | 147016 | 47077860 ~ 47085038 (+) |
| AMCG00013923 | NA | coding | upstream | 205080 | 47026485 ~ 47026974 (+) |
| AMCG00013918 | NA | coding | upstream | 219792 | 47010292 ~ 47012262 (+) |
| AMCG00013912 | LOC106565692 | coding | upstream | 361341 | 46858640 ~ 46870713 (+) |
| AMCG00013939 | lrrn2,LOC108425772 | coding | downstream | 292244 | 47541233 ~ 47543434 (+) |
| AMCG00013941 | LOC106566646,LOC106571888 | coding | downstream | 475445 | 47724434 ~ 47730274 (+) |
| AMCG00013953 | NA | coding | downstream | 836970 | 48085959 ~ 48097083 (+) |
| AMCG00013952 | LOC108250382 | coding | downstream | 850687 | 48099676 ~ 48143917 (+) |
| AMCG00013951 | NA | coding | downstream | 896409 | 48145398 ~ 48158245 (+) |
| G47728 | NA | non-coding | upstream | 75350 | 47147355 ~ 47156704 (+) |
| G47684 | NA | non-coding | upstream | 255868 | 46975516 ~ 46976186 (+) |
| G47681 | NA | non-coding | upstream | 260516 | 46969738 ~ 46971538 (+) |
| G47669 | NA | non-coding | upstream | 297277 | 46930467 ~ 46934777 (+) |
| G47580 | NA | non-coding | upstream | 761583 | 46419132 ~ 46470471 (+) |
| G47767 | NA | non-coding | downstream | 7508 | 47256497 ~ 47258758 (+) |
| G47791 | NA | non-coding | downstream | 157627 | 47406616 ~ 47407552 (+) |
| G47797 | NA | non-coding | downstream | 172027 | 47421016 ~ 47421229 (+) |
| G47804 | NA | non-coding | downstream | 296203 | 47545192 ~ 47545591 (+) |
| G47810 | NA | non-coding | downstream | 303170 | 47552159 ~ 47583902 (+) |
| AMCG00013927 | LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 | other | upstream | 4085 | 47219919 ~ 47227969 (+) |
| AMCG00013919 | LOC102792503,LOC106583503,LOC106565096 | other | upstream | 158346 | 47037095 ~ 47073708 (+) |
| AMCG00013879 | dennd2d | other | upstream | 1272860 | 45943571 ~ 45959194 (+) |
| G47398 | NA | other | upstream | 1290148 | 45934659 ~ 45941906 (+) |
| AMCG00013872 | NA | other | upstream | 1408826 | 45816372 ~ 45823228 (+) |
| AMCG00013943 | NA | other | downstream | 503225 | 47752214 ~ 47819723 (+) |
| AMCG00013961 | NA | other | downstream | 990711 | 48239700 ~ 48258433 (+) |
| G48018 | NA | other | downstream | 1019765 | 48268754 ~ 48269272 (+) |
| G48026 | NA | other | downstream | 1032074 | 48281063 ~ 48351285 (+) |
| AMCG00013971 | lamtor5,xip,LOC106566397,LOC107668015 | other | downstream | 1284897 | 48533886 ~ 48546200 (+) |
