G47767


Basic Information

Item Value
gene id G47767
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 47256497 ~ 47258758 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU59611
aacagtgtgtgAATTCCTTTATTTCTGGTACATTACAGAGTTTCAGAGCGTCAGCAgaagattgatttatttgatcagGCATGACTTCCACAAATGTGATGTAAGATGTGAAGAGAACACACTTAATTTCCAGATTTGTAATgtataatacatgtatgtatgtgtgtgtgtgtttcctgtgtattttctgctgttttcaGAAATGATTAAGGTGAACACTGAATCGAGTACTCAAATCTCTGAAGCCTACATCAGACTGGAGTCAGCGGGGCGGGTCTGTCAATTGGAACGAGGAAGAGCAGAGCGGTGGAGCAGCAATTGATTCACTGTGATGGAGTGTAAGGACAAGGGGAGATGTGCAGGACATCCTAAGGCCAGTCGCAACACTTGCACGCGTCGATGAAGACCAGCCCCGGCTGACACTTCTGCAGGTAGGTGGCGCCGCGATAGCAGTGGTAGTAGGTGGTGGGGTCGTCTGGGTTGGGGTACAGACCGTCCAGCCTGTCATCACAGAATTTGCTtggtggggtggtgggggggggcttaGTGGTGGTGGGTTTCGGGTAGCGTAGGGCACCTGCTGGTCCTCAATCCACTGGACTTTAGTGCTCTCGAGGAATGTGCAGAT

Function

NR:

description
PREDICTED: exostosin-2

GO: NA

KEGG:

id description
ko04976 Bile secretion

RNA

RNA id representative length rna type GC content exon number start site end site
TU59611 True 628 lncRNA 0.49 2 47256497 47258758

Neighbor

gene id symbol gene type direction distance location
AMCG00013924 etnk2,LOC106565623,LOC107694884 coding upstream 124321 47123708 ~ 47132176 (+)
AMCG00013917 NA coding upstream 171459 47077860 ~ 47085038 (+)
AMCG00013923 NA coding upstream 229523 47026485 ~ 47026974 (+)
AMCG00013918 NA coding upstream 244235 47010292 ~ 47012262 (+)
AMCG00013912 LOC106565692 coding upstream 385784 46858640 ~ 46870713 (+)
AMCG00013939 lrrn2,LOC108425772 coding downstream 282475 47541233 ~ 47543434 (+)
AMCG00013941 LOC106566646,LOC106571888 coding downstream 465676 47724434 ~ 47730274 (+)
AMCG00013953 NA coding downstream 827201 48085959 ~ 48097083 (+)
AMCG00013952 LOC108250382 coding downstream 840918 48099676 ~ 48143917 (+)
AMCG00013951 NA coding downstream 886640 48145398 ~ 48158245 (+)
G47762 NA non-coding upstream 7508 47232054 ~ 47248989 (+)
G47728 NA non-coding upstream 99793 47147355 ~ 47156704 (+)
G47684 NA non-coding upstream 280311 46975516 ~ 46976186 (+)
G47681 NA non-coding upstream 284959 46969738 ~ 46971538 (+)
G47669 NA non-coding upstream 321720 46930467 ~ 46934777 (+)
G47791 NA non-coding downstream 147858 47406616 ~ 47407552 (+)
G47797 NA non-coding downstream 162258 47421016 ~ 47421229 (+)
G47804 NA non-coding downstream 286434 47545192 ~ 47545591 (+)
G47810 NA non-coding downstream 293401 47552159 ~ 47583902 (+)
G47936 NA non-coding downstream 799975 48058733 ~ 48059592 (+)
AMCG00013927 LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 other upstream 28528 47219919 ~ 47227969 (+)
AMCG00013919 LOC102792503,LOC106583503,LOC106565096 other upstream 182789 47037095 ~ 47073708 (+)
AMCG00013879 dennd2d other upstream 1297303 45943571 ~ 45959194 (+)
G47398 NA other upstream 1314591 45934659 ~ 45941906 (+)
AMCG00013872 NA other upstream 1433269 45816372 ~ 45823228 (+)
AMCG00013943 NA other downstream 493456 47752214 ~ 47819723 (+)
AMCG00013961 NA other downstream 980942 48239700 ~ 48258433 (+)
G48018 NA other downstream 1009996 48268754 ~ 48269272 (+)
G48026 NA other downstream 1022305 48281063 ~ 48351285 (+)
AMCG00013971 lamtor5,xip,LOC106566397,LOC107668015 other downstream 1275128 48533886 ~ 48546200 (+)

Expression


Co-expression Network