G47797


Basic Information

Item Value
gene id G47797
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 47421016 ~ 47421229 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU59652
CGCGAAGGTCGTTGTGTAGCCAGTGCTGAAGCAGGAGACGGACTGGAGAACAAACCTTTAAACCTACTTTATAGGGAAGCTTTTATCATTCAAACTATTACCTATCTGTCTACGGTTAATAATGACATCATtcttattatgtattttctttcctcccAATCAACAACCACAAACCACAAGAGTAACCATAAAGTAACCATATAGACCTCCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU59652 True 214 lncRNA 0.39 1 47421016 47421229

Neighbor

gene id symbol gene type direction distance location
AMCG00013924 etnk2,LOC106565623,LOC107694884 coding upstream 288840 47123708 ~ 47132176 (+)
AMCG00013917 NA coding upstream 335978 47077860 ~ 47085038 (+)
AMCG00013923 NA coding upstream 394042 47026485 ~ 47026974 (+)
AMCG00013918 NA coding upstream 408754 47010292 ~ 47012262 (+)
AMCG00013912 LOC106565692 coding upstream 550303 46858640 ~ 46870713 (+)
AMCG00013939 lrrn2,LOC108425772 coding downstream 120004 47541233 ~ 47543434 (+)
AMCG00013941 LOC106566646,LOC106571888 coding downstream 303205 47724434 ~ 47730274 (+)
AMCG00013953 NA coding downstream 664730 48085959 ~ 48097083 (+)
AMCG00013952 LOC108250382 coding downstream 678447 48099676 ~ 48143917 (+)
AMCG00013951 NA coding downstream 724169 48145398 ~ 48158245 (+)
G47791 NA non-coding upstream 13464 47406616 ~ 47407552 (+)
G47767 NA non-coding upstream 162258 47256497 ~ 47258758 (+)
G47762 NA non-coding upstream 172027 47232054 ~ 47248989 (+)
G47728 NA non-coding upstream 264312 47147355 ~ 47156704 (+)
G47684 NA non-coding upstream 444830 46975516 ~ 46976186 (+)
G47804 NA non-coding downstream 123963 47545192 ~ 47545591 (+)
G47810 NA non-coding downstream 130930 47552159 ~ 47583902 (+)
G47936 NA non-coding downstream 637504 48058733 ~ 48059592 (+)
G47937 NA non-coding downstream 638686 48059915 ~ 48060814 (+)
G47958 NA non-coding downstream 740982 48162211 ~ 48162427 (+)
AMCG00013927 LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 other upstream 193047 47219919 ~ 47227969 (+)
AMCG00013919 LOC102792503,LOC106583503,LOC106565096 other upstream 347308 47037095 ~ 47073708 (+)
AMCG00013879 dennd2d other upstream 1461822 45943571 ~ 45959194 (+)
G47398 NA other upstream 1479110 45934659 ~ 45941906 (+)
AMCG00013872 NA other upstream 1597788 45816372 ~ 45823228 (+)
AMCG00013943 NA other downstream 330985 47752214 ~ 47819723 (+)
AMCG00013961 NA other downstream 818471 48239700 ~ 48258433 (+)
G48018 NA other downstream 847525 48268754 ~ 48269272 (+)
G48026 NA other downstream 859834 48281063 ~ 48351285 (+)
AMCG00013971 lamtor5,xip,LOC106566397,LOC107668015 other downstream 1112657 48533886 ~ 48546200 (+)

Expression


Co-expression Network