Gene
RNA
| Item | Value |
|---|---|
| gene id | G47983 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 48206249 ~ 48206703 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59886 | True | 266 | lncRNA | 0.59 | 2 | 48206249 | 48206703 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013951 | NA | coding | upstream | 48004 | 48145398 ~ 48158245 (+) |
| AMCG00013952 | LOC108250382 | coding | upstream | 62332 | 48099676 ~ 48143917 (+) |
| AMCG00013953 | NA | coding | upstream | 109166 | 48085959 ~ 48097083 (+) |
| AMCG00013941 | LOC106566646,LOC106571888 | coding | upstream | 475975 | 47724434 ~ 47730274 (+) |
| AMCG00013939 | lrrn2,LOC108425772 | coding | upstream | 662815 | 47541233 ~ 47543434 (+) |
| AMCG00013960 | NA | coding | downstream | 20712 | 48227415 ~ 48234227 (+) |
| AMCG00013962 | NA | coding | downstream | 30060 | 48236763 ~ 48239245 (+) |
| AMCG00013963 | NA | coding | downstream | 211554 | 48418257 ~ 48422793 (+) |
| AMCG00013969 | NA | coding | downstream | 283841 | 48490544 ~ 48494312 (+) |
| AMCG00013970 | NA | coding | downstream | 296466 | 48503169 ~ 48504611 (+) |
| G47981 | NA | non-coding | upstream | 1430 | 48202526 ~ 48204819 (+) |
| G47980 | NA | non-coding | upstream | 3806 | 48200626 ~ 48202443 (+) |
| G47972 | NA | non-coding | upstream | 26528 | 48179191 ~ 48179721 (+) |
| G47961 | NA | non-coding | upstream | 36609 | 48168639 ~ 48169640 (+) |
| G47960 | LOC107654379,LOC107756628,LOC107573300,LOC107751188 | non-coding | upstream | 41213 | 48164795 ~ 48165036 (+) |
| G48007 | NA | non-coding | downstream | 46076 | 48252779 ~ 48253145 (+) |
| G48030 | NA | non-coding | downstream | 127854 | 48334557 ~ 48346350 (+) |
| G48055 | NA | non-coding | downstream | 179487 | 48386190 ~ 48386491 (+) |
| G48060 | NA | non-coding | downstream | 198900 | 48405603 ~ 48405818 (+) |
| G48062 | NA | non-coding | downstream | 200780 | 48407483 ~ 48408809 (+) |
| AMCG00013943 | NA | other | upstream | 386526 | 47752214 ~ 47819723 (+) |
| AMCG00013927 | LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 | other | upstream | 978280 | 47219919 ~ 47227969 (+) |
| AMCG00013919 | LOC102792503,LOC106583503,LOC106565096 | other | upstream | 1132541 | 47037095 ~ 47073708 (+) |
| AMCG00013879 | dennd2d | other | upstream | 2247055 | 45943571 ~ 45959194 (+) |
| G47398 | NA | other | upstream | 2264343 | 45934659 ~ 45941906 (+) |
| AMCG00013961 | NA | other | downstream | 32997 | 48239700 ~ 48258433 (+) |
| G48018 | NA | other | downstream | 62051 | 48268754 ~ 48269272 (+) |
| G48026 | NA | other | downstream | 74360 | 48281063 ~ 48351285 (+) |
| AMCG00013971 | lamtor5,xip,LOC106566397,LOC107668015 | other | downstream | 327183 | 48533886 ~ 48546200 (+) |
| G48142 | NA | other | downstream | 548250 | 48754953 ~ 48760712 (+) |
