Gene
RNA
| Item | Value |
|---|---|
| gene id | G47991 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 48179267 ~ 48179685 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0060841 | venous blood vessel development | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU59896 | True | 229 | lncRNA | 0.46 | 3 | 48179267 | 48179685 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013954 | NA | coding | downstream | 2286 | 48173372 ~ 48176981 (-) |
| AMCG00013955 | NA | coding | downstream | 13605 | 48160674 ~ 48165662 (-) |
| AMCG00013948 | NA | coding | downstream | 131201 | 48031392 ~ 48048066 (-) |
| AMCG00013950 | NA | coding | downstream | 154935 | 48022064 ~ 48024332 (-) |
| AMCG00013949 | NA | coding | downstream | 165016 | 48005699 ~ 48014251 (-) |
| AMCG00013956 | NA | coding | upstream | 210 | 48179895 ~ 48180577 (-) |
| AMCG00013958 | NA | coding | upstream | 6602 | 48186287 ~ 48189302 (-) |
| AMCG00013957 | NA | coding | upstream | 22894 | 48202579 ~ 48212028 (-) |
| AMCG00013959 | NA | coding | upstream | 40547 | 48220232 ~ 48227111 (-) |
| AMCG00013965 | NA | coding | upstream | 81662 | 48261347 ~ 48264373 (-) |
| G47917 | NA | non-coding | downstream | 162429 | 48016561 ~ 48016838 (-) |
| G47839 | NA | non-coding | downstream | 484373 | 47689845 ~ 47694894 (-) |
| G47809 | lrrn2,LOC108425772 | non-coding | downstream | 633676 | 47540563 ~ 47545591 (-) |
| G47807 | NA | non-coding | downstream | 683583 | 47495411 ~ 47495684 (-) |
| G47766 | NA | non-coding | downstream | 952013 | 47225801 ~ 47227254 (-) |
| G47995 | NA | non-coding | upstream | 36190 | 48215875 ~ 48216209 (-) |
| G48021 | NA | non-coding | upstream | 89659 | 48269344 ~ 48270564 (-) |
| G48025 | NA | non-coding | upstream | 97051 | 48276736 ~ 48277321 (-) |
| G48044 | NA | non-coding | upstream | 128879 | 48308564 ~ 48344493 (-) |
| G48047 | NA | non-coding | upstream | 150033 | 48329718 ~ 48339610 (-) |
| G47896 | NA | other | downstream | 204352 | 47967425 ~ 47974915 (-) |
| AMCG00013946 | golt1a,got1a,LOC106565310 | other | downstream | 310404 | 47864850 ~ 47868863 (-) |
| AMCG00013932 | ruxe,snrpe | other | downstream | 978370 | 47188595 ~ 47200897 (-) |
| G47666 | NA | other | downstream | 1303897 | 46871869 ~ 46875370 (-) |
| AMCG00013903 | NA | other | downstream | 1868149 | 46299161 ~ 46311118 (-) |
| AMCG00013964 | NA | other | upstream | 186358 | 48366043 ~ 48375096 (-) |
| AMCG00013967 | NA | other | upstream | 276218 | 48455903 ~ 48479577 (-) |
| AMCG00013991 | psma5,LOC107685984,LOC107736674 | other | upstream | 638298 | 48817983 ~ 48821156 (-) |
| G48373 | NA | other | upstream | 1304815 | 49484500 ~ 49484767 (-) |
| G48392 | LOC101077885,LOC107385168,LOC106516062 | other | upstream | 1315042 | 49494727 ~ 49498630 (-) |
