Gene
RNA
| Item | Value |
|---|---|
| gene id | G48074 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 48472380 ~ 48475448 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60027 | True | 382 | lncRNA | 0.54 | 2 | 48472380 | 48475448 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013963 | NA | coding | upstream | 49587 | 48418257 ~ 48422793 (+) |
| AMCG00013962 | NA | coding | upstream | 233135 | 48236763 ~ 48239245 (+) |
| AMCG00013960 | NA | coding | upstream | 238153 | 48227415 ~ 48234227 (+) |
| AMCG00013951 | NA | coding | upstream | 314135 | 48145398 ~ 48158245 (+) |
| AMCG00013952 | LOC108250382 | coding | upstream | 328463 | 48099676 ~ 48143917 (+) |
| AMCG00013969 | NA | coding | downstream | 15096 | 48490544 ~ 48494312 (+) |
| AMCG00013970 | NA | coding | downstream | 27721 | 48503169 ~ 48504611 (+) |
| AMCG00013968 | slc16a4,LOC106572850,LOC107591855 | coding | downstream | 71806 | 48547254 ~ 48572929 (+) |
| AMCG00013977 | NA | coding | downstream | 120155 | 48595603 ~ 48598036 (+) |
| AMCG00013975 | NA | coding | downstream | 136194 | 48611642 ~ 48616152 (+) |
| G48073 | NA | non-coding | upstream | 15500 | 48455921 ~ 48456880 (+) |
| G48062 | NA | non-coding | upstream | 63571 | 48407483 ~ 48408809 (+) |
| G48060 | NA | non-coding | upstream | 66562 | 48405603 ~ 48405818 (+) |
| G48055 | NA | non-coding | upstream | 85889 | 48386190 ~ 48386491 (+) |
| G48030 | NA | non-coding | upstream | 126030 | 48334557 ~ 48346350 (+) |
| G48075 | NA | non-coding | downstream | 17597 | 48493045 ~ 48494039 (+) |
| G48091 | NA | non-coding | downstream | 30423 | 48505871 ~ 48506198 (+) |
| G48093 | NA | non-coding | downstream | 39244 | 48514692 ~ 48514910 (+) |
| G48121 | NA | non-coding | downstream | 104523 | 48579971 ~ 48620338 (+) |
| G48134 | strip1 | non-coding | downstream | 210519 | 48685967 ~ 48746141 (+) |
| G48026 | NA | other | upstream | 121095 | 48281063 ~ 48351285 (+) |
| G48018 | NA | other | upstream | 203108 | 48268754 ~ 48269272 (+) |
| AMCG00013961 | NA | other | upstream | 213947 | 48239700 ~ 48258433 (+) |
| AMCG00013943 | NA | other | upstream | 652657 | 47752214 ~ 47819723 (+) |
| AMCG00013927 | LOC108435245,LOC102295207,LOC101474852,LOC101474572,LOC102198786 | other | upstream | 1244411 | 47219919 ~ 47227969 (+) |
| AMCG00013971 | lamtor5,xip,LOC106566397,LOC107668015 | other | downstream | 58438 | 48533886 ~ 48546200 (+) |
| G48142 | NA | other | downstream | 279505 | 48754953 ~ 48760712 (+) |
| G48150 | NA | other | downstream | 301049 | 48776497 ~ 48778459 (+) |
| AMCG00013985 | NA | other | downstream | 345802 | 48821250 ~ 48828975 (+) |
| G48235 | LOC105889183 | other | downstream | 539181 | 49014629 ~ 49095546 (+) |
