G48150


Basic Information

Item Value
gene id G48150
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 48776497 ~ 48778459 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU60116
TCCTctcattattgattttattgttacagaataataaacatgtttgtaaaataaaagtacGATTGATTTTATAGCTGAATGGTGTACACAGTACTTTTCCTAAACAGCTTAGTTATTCCAAGACTGTTCATgcttgaaaaacaatacaatatatataaaaaatgattatGTACAAACCCTCCCTTttccccccgacacacacacacatacaattctCTATACATGACTTATTTGTTCAAGTACAAATATCTCTACATGCAAAAGCCCTTCAGGTTGAATTCAAAGACAAGACTACCAGTAATGTGTGACAAACACCGATTACCTACGGTTGTTTGCTctgtgatgatgattataaacATCCGTCTGTCCCACACAGACTTTAAAAAGTACGAAcaatcaaaaccaaacaaaaagatCCATTCTGATTCGGACCGGGGGCAGACTGACACTGTTCCAGCTCCAGTGCATCGCAGTATCCCAGGTCATGGTGTGAGAACAGCAGATCAAAGCACAATCTCTCCGTTTTATTGCTTGactttgcaaaaacaaaaaaaaacacaaaaatacacttcTGCATGGTGCTGGGGGAATAAAACCTACACACACTTTGTCCATcaggcaaaaacaacaacaaagatttAAACTGCCAGCGCTTTGTGAGCTCAGTCTCAGGACCACCGCGGCCCCCCGGAGTACGAGAGACCCCCGCAGACTGCCGCCCTGGACTGGCTGCACCCAGGCGCCAGGGAGGACCTCACTAACCCGTCTGCTGTGTCTGCGTCTGATCGGAGCTCTCAGCAGGTGTTGTGCAGGCGGGTGGGAAGCACTGGGGGAACATTTCcagcaaacagaaaatgttctctTGCTTTTGAagcaaccccacccccccccctcactcGCACTGGGCAGGAACAGCACGGATCTCgtgttgctgtttttccatttccccACCTCCCTCAAAGAaaacccccaccccaacccacTCAGTTGTTCAGTGTTgcgttttgaaaacaaaaactaaaacacttaTGCTACCAAGGCAAACGCAACATCTCCCATTCccagaattatacatttatatacataatacaaaaaaatatactaaaagtaaacaaattacATGGTACAAAGATGCACTACATCTACAGCTGCTACCCATTTTCAGCAAAGCCATTGGCCAGACTCCGGTCACAGGTACCGGCTCAGTCACACAAAGACCCAGAGATGGTCAGCAACGCTGCGGGACGGCAGAGAAAGAACCAGAACCTCCAAGAGCTTCTAGAACAGCGTCTCAAGAGTTCCTCCTGCTAACCCAGCAACATCACCGCACCGGCACCGGACAGCATCGCCCAGAAACAAGACTAACAGATCAACGCTACTttggcaaaacaaattaaacaaacgcTATGTTTTAATAGGGCATCGCcttacagcataataaatacaaatcaaacaagTAAACCTATGGGCATTCtagagtaaaataataaaatacatgtctAATTTTCCATAACCCCCTCATAAAACATCAAACAACaaggacaaaataaatgctgGTAAAGTGTGGGGCAAGAGCTCGGTGAGCGGAGGGAGAGCAGGGGCCGGGCAGGGGTGGACTGTCAGCCCCGTGTTGAATAGAAGATTGATGgggttaaaataatacaaatgaaggAGGCAAGGACTGATGTCTGAGACCCAGCTCAGCGAGGCGGAGACAGGTGCCCAGGGGCACACGAGGGGCCGCaacttaaaacaataatgaagaGGGAAATAAAACGTACGACGTGGGCCTGGAGAAGGAATTTAGTTTCTCTTTCTGGATGTCTGAAGTTGCCAAACAGACCCTGCCCGGGACGGACCATCCACATCACACCGGCTCCACACCAGTCCCTgcgcctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60116 True 1899 TUCP 0.46 2 48776497 48778459

Neighbor

gene id symbol gene type direction distance location
AMCG00013978 NA coding upstream 50239 48715370 ~ 48726258 (+)
AMCG00013975 NA coding upstream 160345 48611642 ~ 48616152 (+)
AMCG00013977 NA coding upstream 178461 48595603 ~ 48598036 (+)
AMCG00013968 slc16a4,LOC106572850,LOC107591855 coding upstream 203568 48547254 ~ 48572929 (+)
AMCG00013970 NA coding upstream 271886 48503169 ~ 48504611 (+)
AMCG00013989 NA coding downstream 10014 48788473 ~ 48790311 (+)
AMCG00013983 psma5 coding downstream 36307 48814766 ~ 48816208 (+)
AMCG00013984 NA coding downstream 54886 48833345 ~ 48838141 (+)
AMCG00013982 NA coding downstream 61072 48839531 ~ 48843626 (+)
AMCG00013988 NA coding downstream 108295 48886754 ~ 48888169 (+)
G48134 strip1 non-coding upstream 30356 48685967 ~ 48746141 (+)
G48121 NA non-coding upstream 156159 48579971 ~ 48620338 (+)
G48093 NA non-coding upstream 261587 48514692 ~ 48514910 (+)
G48091 NA non-coding upstream 270299 48505871 ~ 48506198 (+)
G48075 NA non-coding upstream 282458 48493045 ~ 48494039 (+)
G48155 NA non-coding downstream 13528 48791987 ~ 48795514 (+)
G48167 NA non-coding downstream 44242 48822701 ~ 48823613 (+)
G48171 NA non-coding downstream 67605 48846064 ~ 48851011 (+)
G48173 NA non-coding downstream 75527 48853986 ~ 48854363 (+)
G48236 NA non-coding downstream 248709 49027168 ~ 49050298 (+)
G48142 NA other upstream 15785 48754953 ~ 48760712 (+)
AMCG00013971 lamtor5,xip,LOC106566397,LOC107668015 other upstream 230297 48533886 ~ 48546200 (+)
G48026 NA other upstream 425212 48281063 ~ 48351285 (+)
G48018 NA other upstream 507225 48268754 ~ 48269272 (+)
AMCG00013961 NA other upstream 518064 48239700 ~ 48258433 (+)
AMCG00013985 NA other downstream 42791 48821250 ~ 48828975 (+)
G48235 LOC105889183 other downstream 236170 49014629 ~ 49095546 (+)
G48231 NA other downstream 298283 49076742 ~ 49100458 (+)
AMCG00013996 NA other downstream 566638 49345097 ~ 49348601 (+)
AMCG00014010 srsf3,LOC103385776,LOC105933254,LOC105017130 other downstream 759595 49538054 ~ 49545335 (+)

Expression


Co-expression Network