Gene
RNA
| Item | Value |
|---|---|
| gene id | G48275 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 49027284 ~ 49050432 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60289 | True | 309 | lncRNA | 0.43 | 2 | 49027284 | 49050432 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013994 | gnat2,LOC107591823,LOC102304204,LOC100703259,LOC102200492,LOC101158106,LOC103367853 | coding | downstream | 101371 | 48918397 ~ 48925913 (-) |
| AMCG00013990 | NA | coding | downstream | 174314 | 48851288 ~ 48852970 (-) |
| AMCG00013986 | NA | coding | downstream | 219697 | 48795219 ~ 48807587 (-) |
| AMCG00013987 | NA | coding | downstream | 234409 | 48792374 ~ 48792875 (-) |
| AMCG00013981 | nfya | coding | downstream | 242059 | 48776500 ~ 48785225 (-) |
| AMCG00014000 | NA | coding | upstream | 242695 | 49293127 ~ 49298717 (-) |
| AMCG00014003 | NA | coding | upstream | 252190 | 49302622 ~ 49310125 (-) |
| AMCG00013998 | NA | coding | upstream | 261878 | 49312310 ~ 49317429 (-) |
| AMCG00013999 | NA | coding | upstream | 269739 | 49320171 ~ 49326142 (-) |
| AMCG00014002 | NA | coding | upstream | 277010 | 49327442 ~ 49330861 (-) |
| G48175 | NA | non-coding | downstream | 376055 | 48645190 ~ 48651229 (-) |
| G48106 | NA | non-coding | downstream | 481009 | 48545237 ~ 48546275 (-) |
| G48092 | NA | non-coding | downstream | 521148 | 48505871 ~ 48506136 (-) |
| G48082 | NA | non-coding | downstream | 528573 | 48461526 ~ 48498711 (-) |
| G48086 | NA | non-coding | downstream | 542974 | 48479448 ~ 48484310 (-) |
| G48363 | NA | non-coding | upstream | 303260 | 49353692 ~ 49354535 (-) |
| G48370 | NA | non-coding | upstream | 402601 | 49453033 ~ 49453872 (-) |
| G48398 | NA | non-coding | upstream | 487296 | 49537728 ~ 49595073 (-) |
| G48430 | NA | non-coding | upstream | 563264 | 49613696 ~ 49613974 (-) |
| G48433 | NA | non-coding | upstream | 567845 | 49618277 ~ 49618955 (-) |
| AMCG00013991 | psma5,LOC107685984,LOC107736674 | other | downstream | 206128 | 48817983 ~ 48821156 (-) |
| AMCG00013967 | NA | other | downstream | 547707 | 48455903 ~ 48479577 (-) |
| AMCG00013964 | NA | other | downstream | 652188 | 48366043 ~ 48375096 (-) |
| G47896 | NA | other | downstream | 1052369 | 47967425 ~ 47974915 (-) |
| AMCG00013946 | golt1a,got1a,LOC106565310 | other | downstream | 1158421 | 47864850 ~ 47868863 (-) |
| G48373 | NA | other | upstream | 434068 | 49484500 ~ 49484767 (-) |
| G48392 | LOC101077885,LOC107385168,LOC106516062 | other | upstream | 444295 | 49494727 ~ 49498630 (-) |
| G48506 | NA | other | upstream | 669333 | 49719765 ~ 49721526 (-) |
| AMCG00014033 | NA | other | upstream | 671314 | 49721746 ~ 49724237 (-) |
| G48510 | NA | other | upstream | 678072 | 49728504 ~ 49729055 (-) |
