G48455


Basic Information

Item Value
gene id G48455
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49703078 ~ 49703528 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU60537
CCCAGCACCGTGGTGGGGGCGCTCTTGTTCTCCGGCCCTCTCTCCAGGCCGtactccagctccagctcctcctgctgGATGCGGGCCTGCTCCAGGATCCGCCGGGACAGTCGCTCATCCACGTACTCGTCCTCGGCCTCCTGCCGCCGATCTCGGCTCTTCACCCGGCCGCTCTGGCGCACCGCGTCGCCCTGCAGGATCTGCTCGGCCAGGGCCATGGTGGCTCCTCTGTGcgcctcctctcctcctcctcctcctcctcttcctcctcctctcaacCTCTTCACTTTGGGCATGTGTGCCGCTTTTGGTGACCCGTCTGTCGTGTCTGTGCTCGGTTCTATGCAGCGGACCTGCCGGCTCTATCCGCACACGGGTCTGGACTCGATCACACACGTGTGTCCTGCGTGCTGCCCCGCACTGTCATGGCGGCAGGGTGCCCCGCACAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60537 True 451 TUCP 0.66 1 49703078 49703528

Neighbor

gene id symbol gene type direction distance location
AMCG00014027 NA coding upstream 6058 49695266 ~ 49697020 (+)
AMCG00014019 NA coding upstream 14421 49686808 ~ 49688657 (+)
AMCG00014014 ppil1,LOC107736561,LOC107667353 coding upstream 20658 49680521 ~ 49682420 (+)
AMCG00014018 celsr2,LOC106565652 coding upstream 29327 49653648 ~ 49673751 (+)
AMCG00014020 NA coding upstream 49916 49647798 ~ 49653162 (+)
AMCG00014026 med20 coding downstream 183 49703711 ~ 49706258 (+)
AMCG00014029 usp49,LOC106583088 coding downstream 13986 49717514 ~ 49728992 (+)
AMCG00014030 NA coding downstream 32886 49736414 ~ 49738159 (+)
AMCG00014037 NA coding downstream 67065 49770593 ~ 49771894 (+)
AMCG00014031 NA coding downstream 68633 49772161 ~ 49772784 (+)
G48449 NA non-coding upstream 23202 49679497 ~ 49679876 (+)
G48372 NA non-coding upstream 218119 49484489 ~ 49484959 (+)
G48354 NA non-coding upstream 246380 49453984 ~ 49456698 (+)
G48353 NA non-coding upstream 249206 49453033 ~ 49453872 (+)
G48243 NA non-coding upstream 590995 49068105 ~ 49112083 (+)
G48460 NA non-coding downstream 26143 49729671 ~ 49731800 (+)
G48467 NA non-coding downstream 50056 49753584 ~ 49754027 (+)
G48479 NA non-coding downstream 89678 49793206 ~ 49793650 (+)
G48552 NA non-coding downstream 153952 49857480 ~ 49857687 (+)
G48560 tmcc2,LOC106565656 non-coding downstream 167578 49871106 ~ 49873377 (+)
G48454 NA other upstream 1135 49701251 ~ 49701943 (+)
G48453 NA other upstream 3456 49698620 ~ 49699622 (+)
G48451 NA other upstream 10717 49689672 ~ 49692361 (+)
AMCG00014021 NA other upstream 83051 49613701 ~ 49620027 (+)
AMCG00014010 srsf3,LOC103385776,LOC105933254,LOC105017130 other upstream 157743 49538054 ~ 49545335 (+)
AMCG00014032 usp49 other downstream 3315 49706843 ~ 49717428 (+)
G48457 NA other downstream 19498 49723026 ~ 49723876 (+)
AMCG00014028 NA other downstream 35784 49739312 ~ 49749169 (+)
G48464 NA other downstream 38324 49741852 ~ 49742514 (+)
AMCG00014038 NA other downstream 104620 49808148 ~ 49813985 (+)

Expression


Co-expression Network