G48467


Basic Information

Item Value
gene id G48467
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49753584 ~ 49754027 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU60553
CTTCCATTGACACGTCTGTCCGCCATCGCTCTGCGTGGACATGTCTGACTTCCGACcactttctatggcaacattgtaaaagcggaCAGCTGACTGAACACAGCATCACTGACACCGACTGAACGCAGCTTCACTGACATCGAACGCAGCTTCACTGACACCGAACGCAgcatcactgacactgactgaacacAGCTTCACGGACACGGACACTGAACACAGCTTCACTGACACGGACACTGAACACAGCATCACTGACACTTACACCGAACACAGCTTCACTGACACTGACTGAACGCAgcatca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60553 True 306 lncRNA 0.52 2 49753584 49754027

Neighbor

gene id symbol gene type direction distance location
AMCG00014030 NA coding upstream 15425 49736414 ~ 49738159 (+)
AMCG00014029 usp49,LOC106583088 coding upstream 24592 49717514 ~ 49728992 (+)
AMCG00014026 med20 coding upstream 47326 49703711 ~ 49706258 (+)
AMCG00014027 NA coding upstream 56564 49695266 ~ 49697020 (+)
AMCG00014019 NA coding upstream 64927 49686808 ~ 49688657 (+)
AMCG00014037 NA coding downstream 16566 49770593 ~ 49771894 (+)
AMCG00014031 NA coding downstream 18134 49772161 ~ 49772784 (+)
AMCG00014040 NA coding downstream 83398 49837425 ~ 49842315 (+)
AMCG00014050 NA coding downstream 156531 49910558 ~ 49916242 (+)
AMCG00014039 NA coding downstream 164600 49918627 ~ 49925703 (+)
G48460 NA non-coding upstream 21784 49729671 ~ 49731800 (+)
G48449 NA non-coding upstream 73708 49679497 ~ 49679876 (+)
G48372 NA non-coding upstream 268625 49484489 ~ 49484959 (+)
G48354 NA non-coding upstream 296886 49453984 ~ 49456698 (+)
G48353 NA non-coding upstream 299712 49453033 ~ 49453872 (+)
G48479 NA non-coding downstream 39179 49793206 ~ 49793650 (+)
G48552 NA non-coding downstream 103453 49857480 ~ 49857687 (+)
G48560 tmcc2,LOC106565656 non-coding downstream 117079 49871106 ~ 49873377 (+)
AMCG00014028 NA other upstream 4415 49739312 ~ 49749169 (+)
G48464 NA other upstream 11070 49741852 ~ 49742514 (+)
G48457 NA other upstream 29708 49723026 ~ 49723876 (+)
AMCG00014032 usp49 other upstream 36156 49706843 ~ 49717428 (+)
G48455 NA other upstream 50056 49703078 ~ 49703528 (+)
AMCG00014038 NA other downstream 54121 49808148 ~ 49813985 (+)
G48566 NA other downstream 159902 49913929 ~ 49914542 (+)
G48578 NA other downstream 182788 49936815 ~ 49948082 (+)
G48583 NA other downstream 202165 49956192 ~ 49956729 (+)

Expression


Co-expression Network