G48510


Basic Information

Item Value
gene id G48510
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49728504 ~ 49729055 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU60605
CAGTGTGAAAAGTGGAAAGTCTttatttcatcatcatcatctctaCCACAAGCTAGTCTAGGAAAGCAGGAGCTCAGTGATCGGTGCGGCGCCTCTCCCACATCACCACGCAGCCCCGCCACAGTGCCGGAGTCAGCAACACAACCCAAgggaacaataaataaaaatagaatgacaacagcaacaaaagtATCCTTGATCCCCGCAGAGCGCCGGCACACGCTCCAGGCCTGTCCTCCACGGTGCTGCCAATGGCCACACGCCGGCCGCAGCGCTCAGTACAGTGCTCTCGCCCACATGGGCAGAGCCGGTGAGCCACGTTTCCCCCGGGTGGGGTCCGCGTGCCGTGGGGGGGGCGACCGTGACATCAGAGGAACTCCCCACCCAGCGGGGGCTCCCACAATCCAGGCGAGGCCAAGGCCGTGTGCGCATCGGGCGTCCTGGCGGCGCACCGGCTCTGGGGGTCCAGGGGGGGTGCGCTCTGCTCGGGGAGGGGGTGCCAGCCAGCGCAGCATCATGGTGACGGCTCGGCCTCCTGGGACTCGGCCTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60605 True 552 TUCP 0.63 1 49728504 49729055

Neighbor

gene id symbol gene type direction distance location
AMCG00014035 NA coding downstream 25131 49697861 ~ 49703373 (-)
AMCG00014034 taf8,LOC106572622,LOC107756368 coding downstream 34340 49689679 ~ 49694164 (-)
AMCG00014024 NA coding downstream 48142 49678320 ~ 49680362 (-)
AMCG00014023 NA coding downstream 121310 49595783 ~ 49607194 (-)
AMCG00014012 NA coding downstream 169744 49557804 ~ 49558760 (-)
AMCG00014036 NA coding upstream 21413 49750468 ~ 49757241 (-)
AMCG00014046 NA coding upstream 54217 49783272 ~ 49788746 (-)
AMCG00014048 NA coding upstream 62288 49791343 ~ 49794766 (-)
AMCG00014047 NA coding upstream 67791 49796846 ~ 49804601 (-)
AMCG00014045 NA coding upstream 84994 49814049 ~ 49818276 (-)
G48509 NA non-coding downstream 1497 49726288 ~ 49727007 (-)
G48508 NA non-coding downstream 2255 49725735 ~ 49726249 (-)
G48494 NA non-coding downstream 52754 49663092 ~ 49675750 (-)
G48439 sars,LOC107697960,LOC107671868,LOC107706967 non-coding downstream 100737 49623810 ~ 49627767 (-)
G48437 NA non-coding downstream 105313 49622097 ~ 49623191 (-)
G48512 NA non-coding upstream 4854 49733909 ~ 49734172 (-)
G48517 NA non-coding upstream 19534 49748589 ~ 49749282 (-)
AMCG00014033 NA other downstream 4267 49721746 ~ 49724237 (-)
G48506 NA other downstream 6978 49719765 ~ 49721526 (-)
G48392 LOC101077885,LOC107385168,LOC106516062 other downstream 229874 49494727 ~ 49498630 (-)
G48373 NA other downstream 243737 49484500 ~ 49484767 (-)
AMCG00013991 psma5,LOC107685984,LOC107736674 other downstream 907348 48817983 ~ 48821156 (-)
G48516 NA other upstream 15891 49744946 ~ 49747551 (-)
AMCG00014043 tmcc2 other upstream 135267 49864322 ~ 49930152 (-)
G48570 tmcc2,LOC106583086,LOC106565656 other upstream 141938 49870993 ~ 49918397 (-)

Expression


Co-expression Network