Gene
RNA
| Item | Value |
|---|---|
| gene id | G48517 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 49748589 ~ 49749282 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0043603 | cellular amide metabolic process | biological_process |
| GO:0043604 | amide biosynthetic process | biological_process |
| GO:1901566 | organonitrogen compound biosynthetic process | biological_process |
| GO:0009059 | macromolecule biosynthetic process | biological_process |
| GO:0043043 | peptide biosynthetic process | biological_process |
| GO:0006412 | translation | biological_process |
| GO:0044267 | cellular protein metabolic process | biological_process |
| GO:0006518 | peptide metabolic process | biological_process |
| GO:0034645 | cellular macromolecule biosynthetic process | biological_process |
| id | description |
|---|---|
| ko03010 | Ribosome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU60616 | True | 562 | lncRNA | 0.56 | 2 | 49748589 | 49749282 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014035 | NA | coding | downstream | 45216 | 49697861 ~ 49703373 (-) |
| AMCG00014034 | taf8,LOC106572622,LOC107756368 | coding | downstream | 54425 | 49689679 ~ 49694164 (-) |
| AMCG00014024 | NA | coding | downstream | 68227 | 49678320 ~ 49680362 (-) |
| AMCG00014023 | NA | coding | downstream | 141395 | 49595783 ~ 49607194 (-) |
| AMCG00014012 | NA | coding | downstream | 189829 | 49557804 ~ 49558760 (-) |
| AMCG00014036 | NA | coding | upstream | 1186 | 49750468 ~ 49757241 (-) |
| AMCG00014046 | NA | coding | upstream | 33990 | 49783272 ~ 49788746 (-) |
| AMCG00014048 | NA | coding | upstream | 42061 | 49791343 ~ 49794766 (-) |
| AMCG00014047 | NA | coding | upstream | 47564 | 49796846 ~ 49804601 (-) |
| AMCG00014045 | NA | coding | upstream | 64767 | 49814049 ~ 49818276 (-) |
| G48512 | NA | non-coding | downstream | 14417 | 49733909 ~ 49734172 (-) |
| G48509 | NA | non-coding | downstream | 21582 | 49726288 ~ 49727007 (-) |
| G48508 | NA | non-coding | downstream | 22340 | 49725735 ~ 49726249 (-) |
| G48494 | NA | non-coding | downstream | 72839 | 49663092 ~ 49675750 (-) |
| G48439 | sars,LOC107697960,LOC107671868,LOC107706967 | non-coding | downstream | 120822 | 49623810 ~ 49627767 (-) |
| G48516 | NA | other | downstream | 1038 | 49744946 ~ 49747551 (-) |
| G48510 | NA | other | downstream | 19534 | 49728504 ~ 49729055 (-) |
| AMCG00014033 | NA | other | downstream | 24352 | 49721746 ~ 49724237 (-) |
| G48506 | NA | other | downstream | 27063 | 49719765 ~ 49721526 (-) |
| G48392 | LOC101077885,LOC107385168,LOC106516062 | other | downstream | 249959 | 49494727 ~ 49498630 (-) |
| AMCG00014043 | tmcc2 | other | upstream | 115040 | 49864322 ~ 49930152 (-) |
| G48570 | tmcc2,LOC106583086,LOC106565656 | other | upstream | 121711 | 49870993 ~ 49918397 (-) |
