G48578


Basic Information

Item Value
gene id G48578
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 49936815 ~ 49948082 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU60704
GCGCTGAGTGTCCTCTGGGACAGTGCGAGTCTGGAGAGGAGAGCGGTGTGAAGACAGCGGCGCTAATCGAGCAGAGCGACGGGTAGAGACGGCTCTGGTACCGACAGGGTGGCACCGCGGCTGACGCTAATGTGATGGAGGACCCGTgagctgtagaggccagcgctctccctgactctggggaaagggctCCCACTGAGCAGCAACACTGGGAGCAGGAGTggggctccagtctgaggcaggacacagagcccacagctacTGAAGACAACCAGGGGCTGAGTGAGCAGCCcaggagcagacagagtgaggaggagctcaGGGGACAGGAGTCTGGCCACATGGCAGAGCCACACACTGAGGGGTCAACACAGGGACTCGGAACGCTGGGATCTGACACCgcagggtcaaaggtcatgcTAAAGGTCATAAAGCACGACCCTGAGCTGGACTGCACCCACACTGCGGATCTCTGCAAGACCCAGTCTCTGGGATCTGAGTGTGGACCTAGTGCAGCTGGTGCTGAGCTGGGCTCCACCAGAACACAGTGTGGACCCAGTCTGCTGTCTgatcacatcaaaacagaggacGACACACTGGAGTGTGTTTACACACTGGAGCCGAGAACACAGACTCCCTTCAGACATGCACTCAGTCATCTCAAAATTGACAATATTACAGACAGCGCCTGGGATCTGTggcctgagctccctgtagctggacagtgtgacctggggcctgagctccctgtagctggacagtgtggCCTGGggcctgagctccctgtagctggacagtgtgacccaCAGTCTGCTGCCTTGAGGACGGGGCTCAGTGGGGGGAGGGACAGTGCACTGAGTGGGGAGAGCCCATCATTGCAGCGCAGACAGCTGCGTCCCAGACCCCCTACACCACCTCGATCCTCCAGCTCCCCCTCCTCACCACTGCAGCATGGAAAACAGCGTCCCCATCACCAGCCCCAGAGTAGGAAGAGCCTCACAGGGGCATCACAGCTGATTAAGCAGCACAGCACTCACAGAGAGAAGACATTCCGCTGTGCCCATTGTGGGAAGTGCTTCTTTCGGGCACATCATCTCATcgcacaccagcgcattcacacaggagagaaaccgttcAGTTGTGACCaatgtgggaagagtttctctcaGATAGGTAGCCTCATCGCACACAGGCgcgttcacacaggagagagaccattctgctgtctgctgtgtgggaagagcttctctCGAACGTCTAATCTCAAAACACACCAGCGGATTCACACAGAGAAACCTTACAGTTGTGCCNN

Function

GO:

id name namespace
GO:0045087 innate immune response biological_process

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU60704 True 1312 TUCP 0.58 2 49936815 49948082

Neighbor

gene id symbol gene type direction distance location
AMCG00014049 NA coding upstream 7795 49927226 ~ 49929020 (+)
AMCG00014039 NA coding upstream 11112 49918627 ~ 49925703 (+)
AMCG00014050 NA coding upstream 20573 49910558 ~ 49916242 (+)
AMCG00014040 NA coding upstream 94500 49837425 ~ 49842315 (+)
AMCG00014031 NA coding upstream 164031 49772161 ~ 49772784 (+)
G48560 tmcc2,LOC106565656 non-coding upstream 63438 49871106 ~ 49873377 (+)
G48552 NA non-coding upstream 79128 49857480 ~ 49857687 (+)
G48479 NA non-coding upstream 143165 49793206 ~ 49793650 (+)
G48467 NA non-coding upstream 182788 49753584 ~ 49754027 (+)
G48460 NA non-coding upstream 205015 49729671 ~ 49731800 (+)
G48566 NA other upstream 22273 49913929 ~ 49914542 (+)
AMCG00014038 NA other upstream 122830 49808148 ~ 49813985 (+)
AMCG00014028 NA other upstream 187646 49739312 ~ 49749169 (+)
G48464 NA other upstream 194301 49741852 ~ 49742514 (+)
G48457 NA other upstream 212939 49723026 ~ 49723876 (+)
G48583 NA other downstream 8110 49956192 ~ 49956729 (+)

Expression


Co-expression Network