AMCG00014071


Basic Information

Item Value
gene id AMCG00014071
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 379210 ~ 386103 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014071
GCCGGGGCGGGACTGCGGCGGGGCTGCAGCGCCTCTCCggccgctctctctctcactctcttccgTGTGGGCGAGCGGAGCACAGCCCGCCTCCTCTCCCGGCAGCGGGGTTTTCCGGACCCGAGCCCAGCGATGCGTGTGCGCTGTCCAGCGGCTGCCGTGTAGGACAGGACTGCCAGAGACCATGCCCGGGGCGGGTAACAGCGTTTGGATCGCATTCCTTTTACTGCCTTCCATTTTCTTATATGCAGGTGCAGAAACAAAGATACTTGGTTTCATTGGGGAGGATGTGATCCTGCCGTGTGCctgcaaattaaataagcaCAACATATACCTAGTGTGGCAAATCGGTGAATCTTCTGTagtggatgcatttattaatggcAGACCATACACAGAAAATCAGAAGCTGGAATTCCAGAACAGAACGCGCTTGTTCGTCGCAGAGCAGATGGGAAACTGCTCCCTCCAGCTATCCAGTGTCTCCGCAGCAGATGAGCACACGTATACCTGCTACTATGAAGGAACTGTGATAGAACAAGTCGTGGTCTCTCTTGAAGTGGCTGCGCATTACAGCAATCCGGTGCTGTTGAGTCCCAACGAGTCTGCAGTGGCCGATGCACCAGAGAGCTACAGCTGCATAGCCACTGGGGGATACCCCAAGGGCCGGATTCACTGGATCCTCAACAACAGCAGTCTGGCCTATTCCCGAGACAACAGGCGTGACGTGGATTCCTGGGACAATGCCACGGGCACATACAGCTTGAGCAGCACCCTGAACATCAGCCTCTCCAGAACAGACGTTCTCACCTGCATGGTGGAGAACAGCCGCCTGCAGGTTAACATCTCTGCATCAAAGACCTTCAGCAGGACGGACGGAGGAAGTCCAGACTCCTCTGCGGACGCCCCTCCAGCCCTGAGAATTGTCATCCTGCCTGCTGTGGTTTGCTGCGGTTTTATCCTGGGTGCGATCTTAATTTGTCTGCTGATGAGAAAATTCAACATGTTTAAGacaAGAGACCCCAGCCCTGCCACTCCTGCCATCGGAGCAGAGAGACAACGCTTGAATGAAGAGCCAGTCTGACGGAGCATGCAGGCCTGAGCTGTCTTGGACGGGACCTGACCATGACCAGCTCGCTAACACTGAGACTGTCCAAGAGACTTCTAGCATTAAGCACAGACTCTCTCTGGCACCTGAGTTCTCCTGCTTCTCTTcactttacacagagagttgcaACCTATAAATATTAGTTTTACTGCAGTAATACCTCAGTTAACAAAGTAGACTTCGTTATCAGAAACTGTTACCTGAGGTAGAATTAAAACGGGAGGCAGGGGATGCGCTCCAGGTCTTCAGAGAAGGGGGGTTAAAGCATTATCATTAAATACAAACCAAATATATCATCAGATGTGTCTacaaacatgaaatatgcaGTAATGTGCTGCACTGAAGCCTTCCCTTGGCCTGCTGGGAATGAACCAGAGCTTATGATCTGTGTTTTCCACTCCAAAGAGATGCATTACACAGCACTGATGGTGACTTGGGTGACATCACTGCCAAAACCACAACTTCATAAATGTTCCATGAGAGGATATTGAGCAATGAGAGCGGGAAGGGGAAGTTGTGAGGAGCTCTGCTGATTGGACCAGCTGGGGCAGACGCATGCATCTCTCCACTGCTGAGCGTTTGATGATGTAAAGCACAACCCGTGGGTGAGTCTACAGGGCAAGGGCGTCATTCTCTACTCTGGAATTCCTTCATATGGCTTCTGTGTTTCCGTCTTCATTTCATTGTGTGCACAAAAACCCATTAATGACCGACTGAGTTTTAAAGGAGCTTCTTTCCCCAAGGATTCATTACCTGAGGTGTTGCTGTACTCTAACGACAGATCGTCCCCATGGGATTTTATTTGTGctatttttttacattgcatGCTAGTATGGTGTCACGTATGCCACATGTATGCCCCAGCTTTTggttttacatattttctgttcaattactttttataaGGGTATATGCTATGCATATGTGTAACATGTAAATTAAAccagctgtttttttatgattgtaaTATCCTGATATGGACAGAAAATTCAATGACTAAATTAAAGCTGGCTGATTAAATCTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014071 True 2134 mRNA 0.49 6 379210 386103

Neighbor

gene id symbol gene type direction distance location
AMCG00014069 NA coding upstream 30035 279130 ~ 349175 (+)
AMCG00014068 NA coding upstream 121550 252275 ~ 257660 (+)
AMCG00014066 NA coding upstream 138082 230578 ~ 241128 (+)
AMCG00014062 NA coding upstream 242989 124143 ~ 136221 (+)
AMCG00014065 NA coding upstream 277278 97427 ~ 101932 (+)
AMCG00014077 NA coding downstream 801456 1187559 ~ 1188536 (+)
AMCG00014083 NA coding downstream 848589 1234692 ~ 1244467 (+)
AMCG00014079 NA coding downstream 858368 1244471 ~ 1245448 (+)
AMCG00014078 NA coding downstream 898827 1284930 ~ 1285907 (+)
AMCG00014085 NA coding downstream 918941 1305044 ~ 1306528 (+)
G67587 NA non-coding upstream 58889 169904 ~ 320321 (+)
G67684 NA non-coding downstream 415161 801264 ~ 801464 (+)
G67685 NA non-coding downstream 418434 804537 ~ 804746 (+)
G67690 NA non-coding downstream 595736 981839 ~ 1022813 (+)
G67698 NA non-coding downstream 863996 1250099 ~ 1250314 (+)
G67699 NA non-coding downstream 889888 1275991 ~ 1276216 (+)
AMCG00014061 NA other upstream 132208 136864 ~ 247002 (+)
G67577 NA other upstream 272088 58449 ~ 107122 (+)
AMCG00014099 NA other downstream 1093816 1479919 ~ 1497604 (+)
AMCG00014104 cyyr1,LOC107751099 other downstream 1449329 1835432 ~ 1838125 (+)
G67801 NA other downstream 1492988 1879091 ~ 1881041 (+)
AMCG00014111 NA other downstream 1514117 1900220 ~ 1902687 (+)
G67896 NA other downstream 1740769 2126872 ~ 2130145 (+)

Expression


Co-expression Network