AMCG00014098


Basic Information

Item Value
gene id AMCG00014098
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1564778 ~ 1569929 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014098
GCCGGGTAAGGTAAGCTTACAGTGGATGTTTTCTCTTCACGCAGCTCGGCGTGTGTGCGGTGCTGGAGGGTCTCTACCGCAGAAACCGGGCTTGAGGGCATCTGGGTGACATGCATGTGTAGATAACGTGGGAAGCACAGGCTCACGGgctgcagggtgtgtgtgtcccggCGCGGGTTATGAGCCGCCTGTGTAAACGGGCTCACAGACCGGCGCACCGCCTGCAGTGTCGTGCAAAGTTTAATATACTGTTTCATGAGGGCGTCGTGAGTGCATGGAGACCGACAGATCTGTCGCCAGGCCTTTGTGTGAACCACGGCTTGTTTTCGTTTTTGCACTAcgagttttctttctctctggtTCATACGCCTACCTCACTGCATTAATTTCTTGGCCTTTGGATCCCCATCGTTATTATTGCCAATTCCTAGGCACGCACAGAAACACAGCCATAACCGCGCCAGTCCCAGTCGTGTGATAACGTCTGCAGCACAGCAGTAAACTGGGCCCTGTGTGTGGGGGCTGCGGCCACCAGTACAAACAGCAGGGCCCGTGgccactgtgtatgtgtgtgcatttatctTTGGCTTAAATCAGCTCTCCTGTGCCGCTGACTCATTTTGTCAGAccacaaataacaataataaaagtattaattCTCTGCCGAAGCAAACATTTCTGCAGACAACCCATCCTCCCTTTAGACCTTATCCCAGCATTACATATAGACTTACAAGTGCAGCTGCACCAGTTGTCTCCCATTGGACATTTGGAAGAGGCCTACGTCTGACAGCGTGGGGACGTCTCCAGTCAGGAAGACAtgaatgttgcttttatttattctgggTAGTTTACCTAAATTCATCGTATTATCAATATGAATCCatgtctgaaacaaaaacagaaaggaacAAAAGGTATaaacattgtcattattttgggaTCAGCCTGCATTAGCTTCAGCCTGCAGACCACCTGGAGGACCATCGTGGACCAGAACCACTGTGCTAAGGGAGTAATCTGATAGTGGGGAGGCATGCTGGATCCCATATTTGAAGAACAGTGACAGCATATTGTGTACAGCTGGAGAAATGGCAGTGTGCCGTGTTGTGTGCGGCAGGATTGACGGTGCCagtgtgttgtgtctgtgcCGCAGGCTCGGGATGTTCCCCACTCCCCTGTGCTCCCACGCGGGCCGGGGCCCCTTCGCAGACGTGTACGAGCCGGCCGAGGATTCGTTCCTGCTGATGGATGCGCTGGAGAAGGACTGTGAGCGACTGCGGCAGATGGGccCGTCTGTGTGTCTGGAGGTGGGCTGTGGTTCCGGGGTGGTCTCGGCGTTCCTGGCCTCAGTCGTTGGACCTCAGGCAGCTTACTTCTGCACCGATGTGAACCCCGCTGCATTGCTTTGCACAGCCGAGACAGGGCGCTGCAACCAGGTCGGCCTGCAGCCGGTCCTCAGTGACCTGCTGCTGTCCGGCCTGGGGGTTTTCTACCTGGTGGCCGTGCAGGAGAATGATCCAGCAGAGATCCTGAGTGTCCTGGGGGAAGCAGGGCTGCGGGGGGAGCTGTGTCTGAAGCGCCAGGCCGGGAGGGAGACCCTGTCCATCCTGCGCTTCTGTAAACCCTAACCTCTGACCTCAGACCTGGGGGACACAAACTCCAGCTGCCCATCTGTAGATGCTTCCCTGGGGGAGGGGCCAGGAGACCACATGGCCTGTCCGGTCTGTTTGCAGCCAGAGATGGCCTTATATGCAGCGCGAGAGTCTCTGCCATCCTGGGAAAATCACGTTAACACTCGGACAGGCTGGCAGCCGTTCTCTGAGCCAGATGTCTGCAGTTGTCTACCAGAACGAGCGTTaaggatttaaaagaaaagaaatctaTTCCCCACCAAGGCTTAAGGACTGAAGCCTAGAGGATGCAGCTCCACACTCGGTCCAGTACTGTATCAGATGACAGTGCGCCCCCCAGCTCTGCAGCTGCAGGACAGAGTCAGTGTGTGGAGAAGGTGTTGTAAGGTGCAATGGATTTCTAACTCTTTGAGCCTCTGTAACCAGCTCTGCAGCCCCACCTCCAAttcactgctgtgttgtgtgctataaatatata
>TU84597
NNAGGGGAGAGTGGACGTCCTGCTGTTCAACCCCCCTTACGTGGTCACGCCGTCAGAAGAGGTGGGCAGCTGTGGCATTGAGGCGTCCTGGGCAGGGGGCAGGCGGGGCCGGGAGGTGACAGACAGGCTGCTCCCTCTGGTCCCACAGCTGCTGTCCGGCCTGGGGGTTTTCTACCTGGTGGCCGTGCAGGAGAATGATCCAGCAGAGATCCTGAGTGTCCTGGGGGAAGCAGGGCTGCGGGGGGAGCTGTGTCTGAAGCGCCAGGCCGGGAGGGAGACCCTGTCCATCCTGCGCTTCTGTAAACCCTAACCTCTGACCTCAGACCTGGGGGACACAAACTCCAGCTGCCCATCTGTAGATGCTTCCCTGGGGGAGGGGCCAGGAGACCACATGGCCTGTCCGGTCTGTTTGCAGCCAGAGATGGCCTTATATGCAGCGCGAGAGTCTCTGCCATCCTGGGAAAATCACGTTAACACTCGGACAGGCTGGCAGCCGTTCTCTGAGCCAGATGTCTGCAGTTGTCTACCAGAACGAGCGTTaaggatttaaaagaaaagaaatctaTTCCCCACCAAGGCTTAAGGACTGAAGCCTAGAGGATGCAGCTCCACACTCGGTCCAGTACTGTATCAGATGACAGTGCGCCCCCCAGCTCTGCAGCTGCAGGACAGAGTCAGTGTGTGGAGAAGGTGTTGTAAGGTGCAATGGATTTCTAACTCTTTGAGCCTCTGTAACCAGCTCTGCAGCCCCACCTCCAAttcactgctgtgttgtgtgctat

Function

GO:

id name namespace
GO:0006479 protein methylation biological_process
GO:0003676 nucleic acid binding molecular_function
GO:0008276 protein methyltransferase activity molecular_function

KEGG:

id description
K19589 N6AMT1; release factor glutamine methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014098 True 2112 mRNA 0.54 5 1564778 1569929
TU84597 False 782 lncRNA 0.58 3 1564787 1566340

Neighbor

gene id symbol gene type direction distance location
AMCG00014097 NA coding downstream 26573 1537057 ~ 1538205 (-)
AMCG00014090 NA coding downstream 110161 1453775 ~ 1454617 (-)
AMCG00014091 NA coding downstream 151931 1391356 ~ 1412847 (-)
AMCG00014082 NA coding downstream 284381 1267242 ~ 1280397 (-)
AMCG00014080 NA coding downstream 332177 1231624 ~ 1232601 (-)
AMCG00014109 NA coding upstream 325736 1895665 ~ 1898909 (-)
AMCG00014107 NA coding upstream 333487 1903416 ~ 1903733 (-)
AMCG00014110 NA coding upstream 336221 1906150 ~ 1915590 (-)
AMCG00014115 son,LOC565999,LOC107698912,LOC107555269,LOC107709257,LOC107698212 coding upstream 459661 2029590 ~ 2031527 (-)
AMCG00014117 NA coding upstream 462312 2032241 ~ 2032429 (-)
G67691 NA non-coding downstream 466799 1097656 ~ 1097979 (-)
G67686 NA non-coding downstream 693151 871053 ~ 871627 (-)
G67658 NA non-coding downstream 1062993 500007 ~ 501785 (-)
G67646 NA non-coding downstream 1177837 386733 ~ 386941 (-)
G67638 NA non-coding downstream 1218653 344414 ~ 346125 (-)
G67818 NA non-coding upstream 250683 1820612 ~ 1821759 (-)
G67849 NA non-coding upstream 372098 1942027 ~ 1942420 (-)
G67881 NA non-coding upstream 486920 2056849 ~ 2059491 (-)
G67911 NA non-coding upstream 780196 2350125 ~ 2373329 (-)
G67953 NA non-coding upstream 1038340 2608269 ~ 2608479 (-)
G67683 NA other downstream 773821 790528 ~ 790957 (-)
G67612 NA other downstream 1393564 61992 ~ 171214 (-)
G67813 NA other upstream 231733 1801662 ~ 1869448 (-)
G67825 NA other upstream 270236 1840165 ~ 1842445 (-)
G67824 LOC103352860 other upstream 289613 1859542 ~ 1863693 (-)
AMCG00014105 gabpa,LOC106586689 other upstream 299921 1869850 ~ 1873422 (-)
AMCG00014108 NA other upstream 309274 1879203 ~ 1885432 (-)

Expression


Co-expression Network