AMCG00014109


Basic Information

Item Value
gene id AMCG00014109
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1895665 ~ 1898909 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014109
GCGCGGCGCTGCGCCCGGCGGACGGGTTTCACTGCAGCACCGAGCTGGAGGAGGAAGACAAGCGCGGCTGTGCGTCCCTGAGAGCCGGACTGAATCACCCGCACCGAGAAGAGCCGCACCGGCCAGCATGGCGTGTCGCGCTGCCTCTCAGCTGTTCTGCCGCAGGCTGGCGTCGGGCTCTGCGGCGGTGCGGCCCGTGTCTGCGGAGCTGCGCAGGTTGCGCAGTGAACTGTTCTCCCGGGAGCAGGCGAGGCAGCGGGCGCAGTTCCCGCGCACAGAGAAGATCGAAGTGTCTCTGCAGGGCCCGGGGCTGCAGGGCACACTGCTCGTCATGAACCGGGGCCTGTCCACCCCCTACAGCTGTGCACAGCaCCTCAGTGAGTGGCAGGTGAGCAGTGTGGCCCTGGCCCTGGTGGATGGGGAGGTGTGGCCTCTGCACCGGCCCCTGACGAGCTCCTGCTCCCTTGCCCTGCTCTCCTTCAAGGACCCTGAGCCTCACCACGTCAACCAGGCGTACTGGCGCTCGTGTGCGATGCTGCTGGGTCAGGTCCTGCAGGCTGCCTTCAAGGAGGAGTTCAATGTGGAGCTGCTGAGGAGCCCAGAGCTGCCAGtgATCTCGGGGGCCTTCTGCTGTGATGTCATCCTGGACCCTGGGCTGGATTCCTGGACCCCCTCCAAGgaGGTCCTGCACTCTCTGTCCCGGGACGCTCAGCTGCTGATCCAGCAGGACCTGCCCTGGGAGCCGCTGGAGGTGCAGCCCGCCGTCGCCCTGGAGGTGTTCAAGCACAGCCGGTGTAAACAGCAGGAGGTGGAGCAGAGGGCGGCGGAGAGCCCCGGTGGCACAGTCACCCTGTACAGGTGTGGGGACCATGTGGATGTGAGTGGGGGCCCCCTGGTGGGCAGGACGGGGCTCTGCGGTCAGTACGAGgTGGAGGTCCCCCTCACAGCAAGTGCAGCTTCTCCTCAGGCCCCCCCCTCAGAGGTCCCTCAGGCCCCCCCCTCAGTCCCCCAGCTGTAGTCCGCCCATGTGCTCCCGGTGTGGCAGTGAGGGGCGGATGCCTCGCCGCAGCTTTCCAGCCTGttcatttgtttcctttggTGTCTttctaataaaatgtatgtaaaactgtgtgtgtgtgtgtatgtgtttgtgagagagagtctGAGATCTCAGGCTGTCTCAATCCATCCCTTGACAGCTGAGACTGAGTTTCC

Function

GO:

id name namespace
GO:0007520 myoblast fusion biological_process
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K17420 MRPL39; large subunit ribosomal protein L39

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014109 True 1215 mRNA 0.65 9 1895665 1898909

Neighbor

gene id symbol gene type direction distance location
AMCG00014097 NA coding downstream 357460 1537057 ~ 1538205 (-)
AMCG00014090 NA coding downstream 441048 1453775 ~ 1454617 (-)
AMCG00014091 NA coding downstream 482818 1391356 ~ 1412847 (-)
AMCG00014082 NA coding downstream 615268 1267242 ~ 1280397 (-)
AMCG00014080 NA coding downstream 663064 1231624 ~ 1232601 (-)
AMCG00014107 NA coding upstream 4507 1903416 ~ 1903733 (-)
AMCG00014110 NA coding upstream 7241 1906150 ~ 1915590 (-)
AMCG00014115 son,LOC565999,LOC107698912,LOC107555269,LOC107709257,LOC107698212 coding upstream 130681 2029590 ~ 2031527 (-)
AMCG00014117 NA coding upstream 133332 2032241 ~ 2032429 (-)
AMCG00014114 son,LOC107709257,LOC107698212 coding upstream 133803 2032712 ~ 2037821 (-)
G67818 NA non-coding downstream 73906 1820612 ~ 1821759 (-)
G67691 NA non-coding downstream 797686 1097656 ~ 1097979 (-)
G67686 NA non-coding downstream 1024038 871053 ~ 871627 (-)
G67658 NA non-coding downstream 1393880 500007 ~ 501785 (-)
G67646 NA non-coding downstream 1508724 386733 ~ 386941 (-)
G67849 NA non-coding upstream 43118 1942027 ~ 1942420 (-)
G67881 NA non-coding upstream 157940 2056849 ~ 2059491 (-)
G67911 NA non-coding upstream 451216 2350125 ~ 2373329 (-)
G67953 NA non-coding upstream 709360 2608269 ~ 2608479 (-)
G68057 NA non-coding upstream 797899 2696808 ~ 2701159 (-)
G67835 NA other downstream 3112 1892063 ~ 1892553 (-)
AMCG00014108 NA other downstream 10233 1879203 ~ 1885432 (-)
AMCG00014105 gabpa,LOC106586689 other downstream 22243 1869850 ~ 1873422 (-)
G67813 NA other downstream 26217 1801662 ~ 1869448 (-)
G67824 LOC103352860 other downstream 31972 1859542 ~ 1863693 (-)
G67832 NA other upstream 1731 1900640 ~ 1902615 (-)
G67843 NA other upstream 17818 1916727 ~ 1918182 (-)
AMCG00014119 NA other upstream 187032 2085941 ~ 2124953 (-)
AMCG00014134 NA other upstream 633045 2531954 ~ 2542697 (-)
AMCG00014144 NA other upstream 742150 2641059 ~ 2653247 (-)

Expression


Co-expression Network