AMCG00014116


Basic Information

Item Value
gene id AMCG00014116
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2038470 ~ 2046247 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014116
ATGCCGCAGCCATGGGGGACTGCAATGAGCCGACCGCACGACCCCAAGCTGCCCCTGCCCCCACTGACACCCTGGAGCGCCCCCACACCCAGACAGGCAaATTGCGGTGCTCCGCTGTGGAGAGCCGTGCCCCCCGCGCCGTGCGTCAAGGGAGTGAGCGCGTGTGTTGTGGACGCACAGGAGGCCGCGGCCCCGGAGAGCACGCCTCCCCCGGAGGAGGTCGCCAGCAAGGAGGGCAGCGAGACGCCGCGCAAGAAGAACAAGAAGCACAAACGGCACAAaagcaagaagaaaaagaagaaacgCAAAGAGGAGAAGAAGTGCCGCTCGGGGTCGGAGAGCAGCTCGGAGTCCGGGCTGGAGTCGGATGGGGAGTCTCGAACCCGAGCCAGCGTGAAGAGCGACGCTCAGCCCCACACAGAGGCCCCCGGGGCCCCGGAGAAGAGCGTCAAGGAGGGCGGCTCGGAGAGGACAGAAGCCCTGGCCTGCGGTCCCGACGAGAAACAGGGCGGCGCTCCGGCAGGCGAGTGGtggggccgggccgggccgtgCGGGGCCACGCTGCTACAGACCAGTCCGGCTGCAGACGAGGCCGAGAGCAAGAGGAAGTCGAAAAGACATTCaagcaagaagaagaagaagaggaggaggaaagaggaagaaaaagaagagaagcaATCTCCTTCTCACTCGAAGTCGGAGAGCACCTCGGTTTCCGGGTCCGAGTCAGAGTCCGAGTTGAAGCCTTCCTCTCGGCCACCCCCCCCCTCGCCCCTGGTCTCTGCGGACAAGCCCCGGGAAAGGCTGCCAGCCGAGCCCCTGCCGCAACCTGCGCCGGGGGTCAGCGAGATGCTGGGCAAGGTGGTCCCCGCGACCACCGCGGAGGGGGAGTCCAGCGAGAGTGTCGTCGAAACGCGCCTCGCATTACACGCAGTGGAGGAGATGTCCTCGGAGCAGAAGCCCGGCGCGGCAGAAGGCAACGCCTCTGGGTCCGAGTGTGCCGATGCCGTCAATCCGTCTAAAGCTCAGGACCTGCCGGATATAATCCCTAAAATAGACGCCGCACACAGCGAGGAGAACGCCCCCAAGGACAAGGAGGCGGAGGCCAAGCCAGACCAGGACTGGGACGGCCCGCCAGAGGAGAAGAGCGACAAAGGCAGAGAGAAGCAGAAGGCCCGCCGCAGCCCCTCGGCCTCGCGCTCCCGGTCCCGGTCCAAGAAGCGTGGCTCGCAGCGCACCCCGTCGAAGAAGAGTCGCAGCCGCTCCCGCAGCCGCAAGCGCCTGGCCGCCAGGTCCGCAGCCCGCAGAGGCCGCTCCTCCTCCAGGAAGATCAGCCCCCGCCGGCGGCGCTCCAGGTCCCGCTCCGCCCGGCGTCGGTCCCGTTCCCGCTCCGTGCGCCGCTCTGGACGCCGGTCCCGCTCGGCCTCGCCCAAGAGGAGCCGGCGGTCCCGCTCCCGCAACAGGAGGTCCAAGTCCTACTCCCCGCGGCGCGCACGGCGTTCCCGCTCGCTCTCCCGGCGCCCACGCTCCCGGTCCAGGAGGTCCCGATCAGCCCGTCACGTCAGGAGGTCACTCTCCAGGTCCCCAGTCAGAGTGCGCCGATCCCGCTCCAGGTCACGCAGGTCCAGGTCAGCCCGCAGGACCCGGCGCTCTCGGTCCCTGTCAGTTCGCAAGACCCGGCGCTCCAGGTCCAGGTCTCGCTCCCGGAACCGGCGGTCCGTCTCCCGCTCTGTCACCAGGCCCCGGCGCTCGGCTTCCCGCAGCCGCAGGTCGCGCTCCAGGTCGCGCAGGAGGGCCCGGCGCACGCGCTCCCGATCCGTGGTCAGAGCCAGGCGGTCCAGGACCAGGTCTCCTCGTAGAGCCAGGCAATCCAAGTCCAGGTCGCCGGCAAGGCGGGCGCGGTCTGGGTCACGTTCTGCAAGGAGGGGCCGGCGTTCCAAGTCCAGATCCCCCAAGAGGACCAAGCGCTCGAGGTCCCGGTCGCCCGCACGTCGCAGGAGGTCCAAGTCCCGGTCCCTCCGACGCGGCAAGCGCTCGAAATCCAGATCCCAGTCCCACCGGCGCCGCTCCCGCTCACAATCGCTCAAAGTGAAGAAGCTGTCCAGGTCCCCATCGCCCAAGCGTTCCAAATCCAGGTCTGTCGTGAGAGACAAATCTAAATCCCGATCAGTCTCCGGAGACAGGCGGTCCCCAGCCAAAGACCGGAGCTTAGTGGGCGCGTCCCCTGCGGGAGGCCCCGTGGGGCCGCTCCTCTCGGCAGCCGTGCCAGACGACGCGCATCCTACTGGAGTGGAGGTGTCCCTCGTCGCCAGAGAGAGCTTGGCAGAAGAGCCTTCAGGGGCAGTGGAGTCCAGTCCATCCCAGCCCGGCGCTCTGTTTGGCCCCGTGGTCCCCCCAGTCGCATTGCCTCTGCCTTTGGAAAGCTCGGATGCAGCATCTGGGGCTCCGGAGCAGGAGATGGAGACGGTGGTCCTGTGTGGGCCATGGAAGCCTGTCCCCCCCTTGATAGACAACAGTGTGACGTTGAAGCTGCAGGCCCCCCCTCCTGAAAGGCCTGTGGCCCCTGCGGTGCAGATGACGAGCATTGGCCCTATGAATGAGAAACCAGCTGAGGGAAAAGCTCTCGAATGTACATCTCTCCAGAAGGACCCGACTTTGAAGCCAGAATCGCCTGCTGTCGACAAGTGCTTTACTCATGAATTGCCTTCCACAGAGCGGGGCTCTACGTGCCCCGGGCCCGAGCAGCCCCTGGCCCTGGGTCCTTCCACTGCAGGGGGGTGGTCGAAACCCTGCACCCAGCCCCCCGAGAGCTCGGATGACAGTGGGTCGTTGTCTTCCACGCCTCAAGGAAGACCGAACCCAtctccgtctccctctcctgagcaacatttaaaatctgCCTCCCCGACCAAAGAAGCGCCTTCCAGGTCTCCTTCGCCACAGTCTGGCCGAGTGTCGCGGTCTGCACCCCCTGCTCCCCACAGAAGTTCCCGGTCTCCCCCTGTCCCCATCCCCATGCAGGCAGAACGCAGCATCCCTGAGGACCACCTGTCTCCCCCTGTCCCCATCCCCATGCGGGCAGAGCGTAGCGTCCCTGAGGACCACCTGTCTCCCCCTGTCCCCATCCCCATGTGGGCAGAGCGCAGCATCCCTGAGGACCACCTGTGTTCCCCTGTCCCCATCCCCATGCGGGCAGAGCGTAGCGTCCCTGAGGACCACCTGTCTCCCCCTGTCCCCATGCGGGCAGAGCACAGCGTCCCTCAGGACCACCAGTCTCCCCCCGTCCCCATGCAGGTAGAGCGCAGCATCCCTGAGGACCATTGGTCTCCCTCGCCCCTCGTCTCCGACGTCCCTGAGGACCACCAGTCTGCCCCTGTCCCAGCGTGGGCAGAACGCAGTGTCCCTGAGGACCACCGCCCCCCCGCGAACCACGCCAGTTCTGAGACTAAATCTTCCGTGGGACTACATTCAAGGTCCCCCAGCCCCCGCCAGGGTAAAACCTCAAAATCTGGAACCAACCGCTCCAGGTCAAGGTCCCCGAGCCCCCGCCCGGCTGACCTCTCGAAATCCGGAACCGACCGCTCCAGGTCAAGGTCCCCGAGCCCCCACCCGGCTGAAATCTTGAAATCTAGAGCCGACCGCTCCAGGTCAAAGTCCCTGAGCCCCCGCCCGGCTGAAATCATGAAATCTAGAACCGACCGCTCCAGGTCAAAGTCCCCGAGCCCCAACCCAGCTGAAATGGTGAAATCCAGAACCGACCGCTCCAGGTCAAGGTCCCCTTCAGTGGAACCCAAACCATCCACCAGGAAACCACACTCGCGATCCAGATCAGTGTCCGTGAATGAAGATGCCAAGTcgacaaaacaaaagaaacgcTCAAAGTCCAGGTCTCCTACCAGGAAAAAGAAATCCAAGTCCAGGAAAAAGAAATCCAAATCCAGGTCTCCTACCAGGAGGAGGAAGTCTAAGTCTCCTGCCAGGAAGAAGAAGTCGAGGTCCAAGTCTCCCGCACGGAAGAAGCGGTCAAGATCAAAATCGGTGTCTCGGAGGAAGCGTTCAAAATCTCCATCTACCAGCCACAGGAAGAAGTCGAAATCGGCGTCTccggtgaggaagaggaggtcCACCTCTCGCAATCGCAAGAGGAAGTCCAAATCCAAGTCGCCCGCCAGGAGGAAACGGTCAAAAACCCGTTCACCAGTGAGAAAGAGGCAATCGAAGTCCCGATCGGTGACACGAACCAAGCGCTCTAAATCTCGCTCGCCCAAGAGGAAGTGGTCCAAGTCCCGCTCTCCGGCCAAGAGGGGCAAGCGGTCCAAGTCCCGCTCTCCGGCCAAGAGGGGCAAGCGGTCTAAGTCCCGCTCTCCGGCCAAGAGGGTAAAGCGGTCGAAATCCCGCTCGCCGGCGAAGAGGAGCAAGCGCTCCAAATCCCACTCGCCAGTGCGCAAGAAGAGGTCCAAGTCCGCGGAGAAGGGCAAGCGCTCCAAGTCTCGCTCCCCGGGCCGGAAGAAGCGTTCGCGGTCGCGCTCGGCCTCCAAGCACCGGCGCAAGTCCCGCTCCAGCTCGCGCGGCCGCCGCTCCAGCTCGCGACGCCGCCAGGCCCGGACCCGCTACCGCAGCCGCTCCATCGACCGGTGGCGCCGGCGCGGGCCCAGCCACTCGCCCATCCTCATCCTGCGCCGCCGGAGATCCACCTCGCGCGCCCGCCGCAGCTCCAGCAAGACCCCTCCGCGTCTCACGGAGTTGGACAAGGACCAGCTGCTGGAGATCGCCAAGGCCAACGCTGCAGCCATGTGCGCCAAGGCGGGCGTGCCCATCCCGGAGAGCCTGAAGCCCAAGGCCATCCTGCAGCTACCCCTGCCGCCCCCAGTGCTGCCCCTgtccctgcccctgcccctgccgcTCCCCATGAGCCTGCCCATGAGCCTGTCCATCAACCTGCCCAACATGAACACCCTGCCCTCCATGAGCGCCATGCCCTCCATGGCCAGCATGCCCTCCATGTCCAACATCCCTGCGCCACTGCCCATCGAGGAGGTGAAGAGGAAGGTGGCACAGAAGGCCAACAGCATCAGCATCAAGGAGCTCACCGAGAAGTGCAAGCTGATCGCGGAGAGCAAGGAGGACGAGAACGAGGTGCTGAACAAGCCGCACGTGTCGGACGACGAGGACGACGAGCGACCCTTCGGCCAGGGGCTGCGCATGGGCGAGAGCAAGGGCATCTCCTTCAGCCTCAGTGTAAGACGCCCCACAGCGCAGCACAGGGCACAGACGGGCACGGGGCACAGCGCAGGGCCCCGCGCACGTCCGAGTCCTGGAGTCTGTTACTCAGATCATGTGACCCCCAGAGCCCCTCCCAGTCCTGCAGACAGTGCAGTGTCTAATGCCCCCGCTATACTGCCCCCCGGTCCCGTGTCTAACCCGGCGCCGCTCTCCCTCCAGAACCCGTCGGCGAAGCCGGTGGCGCGGACCGAGGTGGCGCTGACCAAGGAGTTCCCCGTGTCGTCGGGGTCGCAGCACCGCAAGAAGGAGGGCGACGGCGCGTACGGGGAGTGGGTGCCCGTGGACACGGCGGCCGGCAAGGACAAGAAGGACGACGTGTTCACCGACACGCCTGTGCAGCGCACCGAGCTAGAGACGGTCACTACCCCCCGCCCTCAGTCCCCCCCCTACGGGCCCCCTGCCAGGCTGCTGTCGCCAGCACACCCACGGACACGGGTCTGTGGGCCGGCAGGGGGCAGTGCCCGCTCCCCTAGCCAGGCAGAGCAGCGTGCCGGTTTAACCAGGCCCCCTGGCCGCACAGTGCACACCGCGCTGGAGCCCCCCATCCTGGCAGCCCCCGAGTCCTGGCCCTTTCGGTACTTCAGCGTGTGGAAGCTCCATAACCAAAATCGCTGGACATTCACTGGTTTAAGCGCCTAA

Function

GO: NA

KEGG:

id description
ko00310 Lysine degradation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014116 True 5922 mRNA 0.65 11 2038470 2046247

Neighbor

gene id symbol gene type direction distance location
AMCG00014114 son,LOC107709257,LOC107698212 coding downstream 649 2032712 ~ 2037821 (-)
AMCG00014117 NA coding downstream 6041 2032241 ~ 2032429 (-)
AMCG00014115 son,LOC565999,LOC107698912,LOC107555269,LOC107709257,LOC107698212 coding downstream 6943 2029590 ~ 2031527 (-)
AMCG00014110 NA coding downstream 122880 1906150 ~ 1915590 (-)
AMCG00014107 NA coding downstream 134737 1903416 ~ 1903733 (-)
AMCG00014118 NA coding upstream 105638 2151885 ~ 2154746 (-)
AMCG00014133 NA coding upstream 130572 2176819 ~ 2177304 (-)
AMCG00014136 NA coding upstream 222270 2268517 ~ 2278983 (-)
AMCG00014138 NA coding upstream 278855 2325102 ~ 2339187 (-)
AMCG00014132 NA coding upstream 496671 2542918 ~ 2548184 (-)
G67849 NA non-coding downstream 96050 1942027 ~ 1942420 (-)
G67818 NA non-coding downstream 216711 1820612 ~ 1821759 (-)
G67691 NA non-coding downstream 940491 1097656 ~ 1097979 (-)
G67686 NA non-coding downstream 1166843 871053 ~ 871627 (-)
G67658 NA non-coding downstream 1536685 500007 ~ 501785 (-)
G67881 NA non-coding upstream 10602 2056849 ~ 2059491 (-)
G67911 NA non-coding upstream 303878 2350125 ~ 2373329 (-)
G67953 NA non-coding upstream 562022 2608269 ~ 2608479 (-)
G68057 NA non-coding upstream 650561 2696808 ~ 2701159 (-)
G68061 NA non-coding upstream 661570 2707817 ~ 2710329 (-)
G67843 NA other downstream 120288 1916727 ~ 1918182 (-)
G67832 NA other downstream 135855 1900640 ~ 1902615 (-)
G67835 NA other downstream 145917 1892063 ~ 1892553 (-)
AMCG00014108 NA other downstream 153038 1879203 ~ 1885432 (-)
AMCG00014105 gabpa,LOC106586689 other downstream 165048 1869850 ~ 1873422 (-)
AMCG00014119 NA other upstream 39694 2085941 ~ 2124953 (-)
AMCG00014134 NA other upstream 485707 2531954 ~ 2542697 (-)
AMCG00014144 NA other upstream 594812 2641059 ~ 2653247 (-)
G68088 NA other upstream 779315 2825562 ~ 2829144 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other upstream 1339510 3385757 ~ 3394754 (-)

Expression


Co-expression Network