AMCG00014130


Basic Information

Item Value
gene id AMCG00014130
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2549354 ~ 2556568 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014130
tccaAGGAGTGGCAGGTGCGAGTGTGGGCGGGCGGGACAGTGAGCGAGCAGCAGGACGTGCTGCTGGGCTGCAGTTTCCTGTGCCAAGTTGGGGGGCAGGGCCTGGGCAAGGGGGCACCCCAGCACCTCATCATCGAGTGGCTGCTGATCAGGCCCGAGGCGGTCTATGTGGTTCTCCACCTGGACATGGACACCCAGAACTCCGAGCAGCACCCACTGTTCCAGGGGCGGGTGGAGCTGGCGTCCAGGCAGTGTGGCAACGCCTCCCTGCTGCTGCACCGCGCCCTGCCCAGTGACAGCGGCCGCTTCAGCTGCCACGTGATGACCGAGTATGGTCGGGGGCGGGGCTTCCTGGAGCTCAACGTCACCCATGAGACACCCCGCCCTGACCCAGAGTCAAGAACAGAGAAGATGCTGACCACACTCTTTCTTGAGATACCAGAGTTCCGCTTGCACCTGATTATTCTGATaccctgtgtgtttgtggcaATACTGATCGGCTGGGTTTTGTATTATATCTTAAGAAGGAGAATCTCATGCGTCCGCCAGCGATCCGCCAGCGATCCACCCAGGCTGGAGGAAGACCCTGCTGCTGGGACTGGGCGGTGTCTCTGCTCTCTGTCTCCAGGGCTTGTCACACAGGGGGTGGGCCATAGCAGAGACCATGATTCTGCTGTGAGGACACTGCTG

Function

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014130 True 690 mRNA 0.61 4 2549354 2556568

Neighbor

gene id symbol gene type direction distance location
AMCG00014128 NA coding upstream 6956 2539703 ~ 2542398 (+)
AMCG00014137 NA coding upstream 52207 2486625 ~ 2497147 (+)
AMCG00014135 NA coding upstream 94798 2451049 ~ 2454556 (+)
AMCG00014140 NA coding upstream 110635 2434817 ~ 2438719 (+)
AMCG00014127 NA coding upstream 127077 2414562 ~ 2422277 (+)
AMCG00014126 NA coding downstream 2031 2558599 ~ 2561177 (+)
AMCG00014147 NA coding downstream 218810 2775378 ~ 2778596 (+)
AMCG00014148 NA coding downstream 232027 2788595 ~ 2790836 (+)
AMCG00014149 NA coding downstream 262974 2819542 ~ 2821456 (+)
AMCG00014161 NA coding downstream 352861 2909429 ~ 2915164 (+)
G67908 NA non-coding upstream 176049 2350129 ~ 2373305 (+)
G67907 NA non-coding upstream 215410 2333491 ~ 2333944 (+)
G67899 NA non-coding upstream 400700 2148449 ~ 2148654 (+)
G67882 NA non-coding upstream 471752 2077303 ~ 2077602 (+)
G67789 NA non-coding upstream 706909 1840165 ~ 1842445 (+)
G67983 NA non-coding downstream 189676 2746244 ~ 2755484 (+)
G67988 NA non-coding downstream 210934 2767502 ~ 2768837 (+)
G67994 NA non-coding downstream 225771 2782339 ~ 2802044 (+)
G67997 NA non-coding downstream 236174 2792742 ~ 2797809 (+)
G68046 NA non-coding downstream 419646 2976214 ~ 2976510 (+)
G67896 NA other upstream 419209 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 646667 1900220 ~ 1902687 (+)
G67801 NA other upstream 668313 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 711229 1835432 ~ 1838125 (+)
AMCG00014099 NA other upstream 1051750 1479919 ~ 1497604 (+)
AMCG00014146 NA other downstream 150272 2706840 ~ 2710329 (+)
AMCG00014196 NA other downstream 1570908 4127476 ~ 4131718 (+)
G68475 NA other downstream 2092632 4649200 ~ 4651964 (+)
G68830 NA other downstream 4789627 7346195 ~ 7349467 (+)
G68848 NA other downstream 4857072 7413640 ~ 7416594 (+)

Expression


Co-expression Network