AMCG00014152


Basic Information

Item Value
gene id AMCG00014152
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2923400 ~ 2928310 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014152
CAATAATTGACGAAACAAGATGAACATGGCCCAGGATACTTTTATGAACGGGGGAATTTGCATACTTCACAAGACAGAAAATGGAAAGCATCACTATGAAGTAGAAAACGTGGTGAGATACACAGAGGACAAGATCAATGCCTCTTTTGTACGGAATGGTGATAAACTGCTGATGATCAATGGATCAAATCTGGAGGATCTGCCACCAGAAGCTTTTGCAAAACTTCTCAGTGAAGGTTCAGTCTCACTGACGGTGCACCAGCAAAGTCGGACCAGACGAGAGGAAACGAGTGAGGGGGAGATGTTTATGAAGCCGTACTTCAAGGAGGATATGTTCCTGAAAATCAGCTTAGAGATGGAGAATAAGAACAGCACGGAGGAGGGAGAAACGCTGAGCGAACAGGAGGGAAATCCCGGAGAAGACGATGACTGCTGCCTGGGTGAGGAGAGCCCCGACTGCGACGTCCAAAACCTGCTGCTGGTGTCCATGAGGAGGACCAGTATCTCGGTGATGGTGGGACGGGGCTGCGAAAACCTGCCAGGACCACCGTGTCGTGACTGCACCACCTGCACCATGAACGAGGTCGTAGTGGTGTCAGAATCCAGTAAAGTGAAACTTGCCAGTATGACTCTCTATTACTACAAAAGTGACGTTGTAGATGGAGAATTCAAAGGAACCCCAGTTACCCTGAATTTCACCAGTTCGAATTGCTTTCTGAAATGCAGTATTGAGCGTGGCAAGGTTACTCTTAGAATTGATACCTGCGAGAAAGAGAAACTGAAGAAGATTTCGAGTGGGAACCCAGAAACCTGGCCGTTTGTCTTCTACATGAAAGCCAGTGGAGAAAACTCTCGAAGTTTCGAGTCTGCCAACTGTCCGGGGTGGTTCATCAAGGACAAAGGAGAGAGAGTGGTGGTATCACCCAACACAAAGGACGGACACTTCTTCATTGTAATCAAGAAATAATCGCTGTGGTGATTGTCTGTGGGGGGCAGACATTCACCTTCCTGAATCTGCAGATGCAGGTTAATTCAATGGTTTGTTCTCTGTTTCAAATATGATTGAAGCTTGTGCTGTGAATATGCCTCAGTGCTCTTGGTCCCATTAATACTACtagattttttacattttaaacattttaaacaatttgaagTACAGTAAAATAAGCTTAATTTTGGCTTCTTGGCAACATTTCTTTCATTGTATGTTTGTAAATTGAGGTTAGGTTTTATACTTTcttattacaatttgtttttaatgttatcaaatcaaattcatatttttttatactcaaatcaaaaacattaaataaatctgctttGTTATTTAATAGAAACGTTCTGTTTGGAAGGTCAGCTCAGTTAATACActttatatttatgaaatctgtatgtatgtgtattgaGTTAACATTTAGAGGACAGAACAGCCAGCAGCTTGCAATCTCATGTAAATGGTTAATATAGCTTTAgataaatctaaaatctaatATTTGTCTAGAATTCCATGTCTCtgtaattaataatgattttgaaaatacttCTTGCTATTTCTACTTCTATttctaacaacaacaacaacaacaaaaacactgcctGATAGAGATGCAAATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014152 True 1616 mRNA 0.40 6 2923400 2928310

Neighbor

gene id symbol gene type direction distance location
AMCG00014161 NA coding upstream 8236 2909429 ~ 2915164 (+)
AMCG00014149 NA coding upstream 101944 2819542 ~ 2821456 (+)
AMCG00014148 NA coding upstream 132564 2788595 ~ 2790836 (+)
AMCG00014147 NA coding upstream 144804 2775378 ~ 2778596 (+)
AMCG00014126 NA coding upstream 362223 2558599 ~ 2561177 (+)
AMCG00014163 NA coding downstream 68135 2996445 ~ 3030703 (+)
AMCG00014162 nhs,LOC103378685 coding downstream 116028 3044338 ~ 3044745 (+)
AMCG00014164 NA coding downstream 221585 3149895 ~ 3166217 (+)
AMCG00014166 NA coding downstream 243524 3171834 ~ 3176055 (+)
AMCG00014165 NA coding downstream 291893 3220203 ~ 3221921 (+)
G67994 NA non-coding upstream 121356 2782339 ~ 2802044 (+)
G67997 NA non-coding upstream 125591 2792742 ~ 2797809 (+)
G67988 NA non-coding upstream 154563 2767502 ~ 2768837 (+)
G67983 NA non-coding upstream 167916 2746244 ~ 2755484 (+)
G67908 NA non-coding upstream 550095 2350129 ~ 2373305 (+)
G68046 NA non-coding downstream 47904 2976214 ~ 2976510 (+)
G68151 NA non-coding downstream 296264 3224574 ~ 3226499 (+)
G68153 NA non-coding downstream 298549 3226859 ~ 3228126 (+)
G68166 NA non-coding downstream 446527 3374837 ~ 3375148 (+)
G68167 NA non-coding downstream 447275 3375585 ~ 3375789 (+)
AMCG00014146 NA other upstream 213071 2706840 ~ 2710329 (+)
G67896 NA other upstream 793255 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 1020713 1900220 ~ 1902687 (+)
G67801 NA other upstream 1042359 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 1085275 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 1199166 4127476 ~ 4131718 (+)
G68475 NA other downstream 1720890 4649200 ~ 4651964 (+)
G68830 NA other downstream 4417885 7346195 ~ 7349467 (+)
G68848 NA other downstream 4485330 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 4536193 7464503 ~ 7482560 (+)

Expression


Co-expression Network