AMCG00014163


Basic Information

Item Value
gene id AMCG00014163
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2996445 ~ 3030703 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014163
ATGGAGCAGAAAGGTGTAGTGTGTATAAATATCGGCTGCGTTAGaaaacaacattttagtCATATTTTGTCTGCGCTTTTCTTCCAGATCACAGAAGTGTGCGGAGCGAAGCGCCTGGGATATTTCAGTACTGCACACTTTTATGTCGCTCTGAAGTTATTGGCTGCAGCACAGTCGGGCCTCCCAGTGCACCTCGAAAGCATTAAAAGTGAACTGCCCCTTCCTAGATTTTTGGGGATGAAAAATGATACAGAGGTCAGGTTCCCAAACCATTCCCAAAACCCGCTGGACAGCCAGGGCCCTCCGTTTGGGACGCCCCCTGTGCCGATCCCCAGGGCGGCCCTCGACCGGATCTCCTTCAGACCCGTGGAGAACCCATCAGATAAACAAgaGCCATGGTCACCTCCACGTTCTCCACAGAGCTCCCCTCCCGACTCTCCACTGAGCTACCGCACCTACCCCTATAGCAAACAGCGAAACGGCAGCGAACCGCTGACAGCTtcctatgaaaacaaacacccagGGTGGCTGGGTCTACAGGAGAGTTCCTCCCCTGGTAGCTATGGATCCAGGTCTTCGCTGGGACACTCCTCCATGCCTCAGGCTCATCCGGTGCCGAGGGCCTCGGAGCAGAGCGCAGTGGATTACCCTGATGACCCCTGGAGGATCACGGAGGAACAGCGGGAATACTACACTAACCAGTTCAGGACCCTGCAGCCGGACCTCGGGGCTCTCATTCTGGgGACTGTTGCAAAGAATTTCTTTACAAAATCGAAGCTTTCGATTCCAGAGCTGTCCCACatttgGGAGCTGAGTGACGTCGACTGCGATGGTGCCCTGACTTTCCCAGAATTCTGTGCGGCCTTCCACCTCATCGTGGCTCGCAAAAATGGCTACCCTCTCCCAGAAGCACTGCCCCCGACCCTGATGCCTAGCTTTCTAGAAAAGGACATGGctCCCCAGCCCGGAGGTGAAGTGTTCTTTGGCTCATTTTCTGAGTCCGTGCCTTTAACCCAGCAACAGAAAGACCCGGCACCTGCCCAGAAGGCCGAGCCGCTGATCCTGTTTGAGGAAGCAGAGTCCCGGCCTGCACAGCCAGACTGCAGATTTGAGGAGAAGAACAAAGCTGAATCGATGCAGCCTACTCTGTCtgagaaaacaacatcaaaGCCAGATCTAAGGGATGTCAGCTCTGTGTCAGCCTTCAGTCCAAAGCGAATACCTGCCATTCAAGACGAGACAACCGAACGCCTTGACAGAGTTCCAGAAAAGCCAGATCCACCACAAGAGCTCGATCACCAGGTGAAGTCGAGAACAAGACCCAGGTCGTATTCGAGCACCTCGATTGACGATGCCATGAAGAAGACTGAGGAGCCCCCCACGCCACCTCCCAGACCCCAGAAGACCCACTCCCGAGCCTCGTCCCTGGACCTCAACAAGCTCTTTCAGCAGAGCAGTCAAGGCTTTAAAGGTGGCTGGCTGCCCCCccctcctgctcttcctccaAGACCCCTCGCCACCCAGATCCCCCATTTCATGCCCAGCACAGAGAGCGCACCAAAGCAAAGCCCAGTGCAGCAGCCTAACTTTGCGGACTTCAGCAAGTTCAGAGAAGAGGAGGAGAACACTGAGGATCGGGGTCCTCCCAGCAAGTCAGCCGTCAGCGCAGAAGAAGGCAGCCCTGCGAAAAAAGAGGGCATGCTGGCCCAGCCCCCACTGAAGCCAGTTCGCAGGAAATATCGTCCAGAGAGTCAGAATCTGGACTCCTCGGACCCTTCTGCCCCTCTGACATCTACCTCCTCTGGGCCTGGGACCAGGACCTCTCAAAAACAAGCCTCCAGGCAGAAGAAAGATATTCAGACAGCCATCCGGAAGAATAAAGAAGCCAACGCGGTCTTGACCCGACTCAACAGCGAGCTCCAACAGCAGCTAAAGCACAGTCTGAGAGATCCCCTGCCCCCCTCCTGGCACTGCCAGCTCCTTCACTCGCCCGTCTGCACAGTTCTCCTAATTTAG

Function

GO: NA

KEGG:

id description
K20068 REPS; RalBP1-associated Eps domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014163 True 2016 mRNA 0.55 20 2996445 3030703

Neighbor

gene id symbol gene type direction distance location
AMCG00014152 NA coding upstream 68135 2923400 ~ 2928310 (+)
AMCG00014161 NA coding upstream 81281 2909429 ~ 2915164 (+)
AMCG00014149 NA coding upstream 174989 2819542 ~ 2821456 (+)
AMCG00014148 NA coding upstream 205609 2788595 ~ 2790836 (+)
AMCG00014147 NA coding upstream 217849 2775378 ~ 2778596 (+)
AMCG00014162 nhs,LOC103378685 coding downstream 13635 3044338 ~ 3044745 (+)
AMCG00014164 NA coding downstream 119192 3149895 ~ 3166217 (+)
AMCG00014166 NA coding downstream 141131 3171834 ~ 3176055 (+)
AMCG00014165 NA coding downstream 189500 3220203 ~ 3221921 (+)
AMCG00014171 NA coding downstream 308649 3339352 ~ 3370944 (+)
G68046 NA non-coding upstream 19935 2976214 ~ 2976510 (+)
G67994 NA non-coding upstream 194401 2782339 ~ 2802044 (+)
G67997 NA non-coding upstream 198636 2792742 ~ 2797809 (+)
G67988 NA non-coding upstream 227608 2767502 ~ 2768837 (+)
G67983 NA non-coding upstream 240961 2746244 ~ 2755484 (+)
G68151 NA non-coding downstream 193871 3224574 ~ 3226499 (+)
G68153 NA non-coding downstream 196156 3226859 ~ 3228126 (+)
G68166 NA non-coding downstream 344134 3374837 ~ 3375148 (+)
G68167 NA non-coding downstream 344882 3375585 ~ 3375789 (+)
G68189 NA non-coding downstream 380275 3410978 ~ 3483649 (+)
AMCG00014146 NA other upstream 286116 2706840 ~ 2710329 (+)
G67896 NA other upstream 866300 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 1093758 1900220 ~ 1902687 (+)
G67801 NA other upstream 1115404 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 1158320 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 1096773 4127476 ~ 4131718 (+)
G68475 NA other downstream 1618497 4649200 ~ 4651964 (+)
G68830 NA other downstream 4315492 7346195 ~ 7349467 (+)
G68848 NA other downstream 4382937 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 4433800 7464503 ~ 7482560 (+)

Expression


Co-expression Network