AMCG00014169


Basic Information

Item Value
gene id AMCG00014169
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 3184977 ~ 3195114 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014169
ATGATCgggaagaagaaaacaaaaacagagaggaggaggaagggaaatTACGACGGGCGTAAGAAAATGAATATGGCCCAATCCAAACTCCAGTCACTTTCACTGTCCTGCCCGCAGAGCCAGCCCCGCACACGGCCGCGCCCAGGGACTTCCCCCCGCCCGGCTGAGCTGCGAGAGGCCCGCCCGGAGGAGAGGCCCGCCCCGGCGCTGCGCCTGAGCCTCCGCCCACGACGCGCGTTTTGTGGCCGTCCTGAAGAAAGTCAAAGTTGCCCGAAGGACGGCGGTACCGAAGCAGGGATGGACCCACGACCCGGGGCCGCCTCTGCCCACAGGAGACGCGCTCCCCAGCGGCCGCTGCGCCGTGCGGCCAGAGCCGGCACCCCCGGGCCGGCCGAGGAGACCTTCAACTTCTCCCACCTGGTTCACAAGCTCCAGTACCAGGGCTATTTCTCGGAGATGGATGTCGCTGTCGACGGCGCGGACTCGGACTGGATGTGCCCCATAGAGTCGTGCTCTCCGGGGCCGGGGGACTCGCCGCTGGGGCGCGGGGTGATGGAGGTGGCTTTCGACCCCGCGGCCGGCGTGTTGAGACCCCGGGACAGAGGCGGGAGGGTGGGCGAGCAGGGGGAAGCGGAGAGGGCAGAGCCGCAGCCCGGGCCAAACTCAGCGGGGACATCTGGCACTCCTGCCGCCGAAGttacatttaggaCTGCTGACATACAAGCCGCGGCCGGCATCTTCACTGCGGCCAAACTGCAGGCTCTGAAGAAGAAGTCTCAGAGCAAACATCTGCATCGGGCTCAGTGGAAGAAAAGGTCGACTTTCTCCAACACTCAGAACTGCCTGATAAAGGAATACATGGCTGCACACCTGGAGGATTTCTACGGGCCCAACAGGAAGGGGACTCCGGAGCGACTGACTCTGtggctggcgctgactgctcaGATTAATGTCCTGGACGGACAGGGAAAGAAGAGCTGGAAACAGGTGCAGAAGCGCTGGCTGAACATCCGGCACGCCGTGGTGGAGAAAGCCATGGCTCTGAACCGTGGAGCTGGGGGGGCTTTGCCAGGCAGCCTGCCGTTGACACACAATGAGAAACTGTTTCTCAACACGTGGATTCCCGGGGCGCTGGACGGAAAGCAAGAGGGAGGCAAGGTGTCTGAGGATTCCCACGCTCACTATGGAAGTAAGGACACTCAGTTGTCCTGTCTGATCTCAGACCTCTTCAGTGCCACTCACACCCAGCCCATCGCCGCCAGCCCCGGACCTCAGAGACAGCCGTCAACAGCCGCAGTCAGCTGTGTCTCGGGCCCCTGCAGGACCTCGGAGCTCCGGCCTGCATGCCAACACCCGGCAGTGCCCACTGACACTCAGGGGGACCTCAGCAGCCACCGGGCCTCAGAGCCCATGGCCTTCACTGCCACAGATCACACCAAGCCTTCGGTGCCTCCCGGGGCAGATGTTTACCCGATCAGAACATCTGTCTCCATGACCTCGAACTCTGGTCTGCCGATGCCCCGACTGGTGCCGGTGTGCTATTCTCCCCTCCGACCTAAGACAGAGGGGAAAAGgccttctcccctctctccctctcccagtgTGCCCAGCCCTCCCCAGCTCCAGCCCCAGGGACCGCCAGGCCAGCTGGCCCACTCGATTGTCCACCCTGTCACCAGTTCAGACTCAACAGCTCAGGCCCCCGCTCCTGCTCGCACTGCCACAGAGACCCAGCGCCGCACCAAGAAGACTATGGAGGGAACCAGGGGCAAAGCCAATCGCAAGACCGGAGCCGCAGTGCGGATCGGGAACCCCGAGCGTGAGGTGCGGATCCCCGCCAGCATCCTGCTGAAGGCCTCGGGGGAGAGCAGCCCCCGCAGTGCCGTGCGTCTGCTCCTGCGCGCCGCGTTCAGCACCCACGTCCTGACCTCCAGCGACGTCACGGGAGATGCTGCCCACAACGTGTCCCAGCTGGACCCCAATCGAATCGCAGCGATCAGGGACTGGGCGTCCTGCGTGGTGTTCATGAACAACATTGCCAGGGGATTGCGCAGTATGGCTAAATACAGAttaAAGTCGACCAGGGAGTCCAAACCAAAGGCACAGACCCTGGAGGAGGTGGGAGAGAAGCCCGGGGGGGGCAGTGTGGACCAGTACTTGGACTGCAGAGAGGTCGCTGCTCCCCCGGCCCAGAAACGCTGCAGACAGCCGCCCGGCCCTTACGTCACTCTGTATAGGCAGCAGTGGGCGCCGAAGCAGGGCCCCCCTCCTGCGCAGGACGCTCTGGGTACGGGGACGTCGGGAAGCTGTGCCCCCTGTGAAGAGGGTCTGGCCTCTGGAGCAGAACACCTGGACAGAGAGGGGCCGCTGTGTAACCGGCAGGGCTTTTCATATTCAACAACATCCGAGACGCAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014169 True 2418 mRNA 0.63 9 3184977 3195114

Neighbor

gene id symbol gene type direction distance location
AMCG00014158 NA coding downstream 232922 2945902 ~ 2952055 (-)
AMCG00014159 ace2 coding downstream 244144 2938547 ~ 2940833 (-)
AMCG00014160 NA coding downstream 247106 2935605 ~ 2937871 (-)
AMCG00014157 LOC106595857 coding downstream 249825 2930614 ~ 2935152 (-)
AMCG00014154 NA coding downstream 280290 2893854 ~ 2904687 (-)
AMCG00014167 NA coding upstream 34066 3229180 ~ 3237028 (-)
AMCG00014168 scml2,LOC104928288 coding upstream 55203 3250317 ~ 3251847 (-)
AMCG00014172 LOC108425706,LOC106572425 coding upstream 177184 3372298 ~ 3375153 (-)
AMCG00014180 NA coding upstream 215864 3410978 ~ 3432333 (-)
AMCG00014178 zrsr2,LOC107729896,LOC106575977,LOC107602790,LOC107753840 coding upstream 259697 3454811 ~ 3462463 (-)
G68124 NA non-coding downstream 152213 3029109 ~ 3032764 (-)
G68077 NA non-coding downstream 379813 2776259 ~ 2805164 (-)
G68078 NA non-coding downstream 382933 2782510 ~ 2802044 (-)
G68076 NA non-coding downstream 414317 2769838 ~ 2770660 (-)
G68073 NA non-coding downstream 418803 2765190 ~ 2766174 (-)
G68162 NA non-coding upstream 31751 3226865 ~ 3228150 (-)
G68224 rbbp7,LOC105893332,LOC100695351,LOC103023991,LOC106520888 non-coding upstream 268321 3463435 ~ 3464792 (-)
G68304 NA non-coding upstream 761888 3957002 ~ 3957266 (-)
G68324 prps2,LOC108413289 non-coding upstream 901101 4096215 ~ 4098475 (-)
G68325 NA non-coding upstream 904450 4099564 ~ 4099927 (-)
G68088 NA other downstream 355833 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 531730 2641059 ~ 2653247 (-)
AMCG00014134 NA other downstream 642280 2531954 ~ 2542697 (-)
AMCG00014119 NA other downstream 1060024 2085941 ~ 2124953 (-)
G67843 NA other downstream 1266795 1916727 ~ 1918182 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other upstream 190643 3385757 ~ 3394754 (-)
AMCG00014228 NA other upstream 2463958 5659072 ~ 5678499 (-)
AMCG00014241 NA other upstream 2864375 6059489 ~ 6108358 (-)
AMCG00014271 NA other upstream 4182974 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 4207038 7402152 ~ 7411890 (-)

Expression


Co-expression Network