AMCG00014183


Basic Information

Item Value
gene id AMCG00014183
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 3558918 ~ 3559709 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014183
ATGACATACCTGGCAAACACTGCCCACCTGCAGTTCTTCAGCTTCTGGTTGGGCGTGGTGGGGTGGATCCTGTCCGCCGTGGCCACCGGACTCATTGAATGGAGGGTTTGGTATGTGTCCGACACAACCGTCATCTCCTCCGGGGTGGCCTGGGTCGGCATCTGGAGGGTCTGTTTCTTCAGCGACGAACTGGTGTTGTCCGAGATGAGAGTGATGTACTGCCGGAGCATCAGCGTCTCGGATGGGTTCGCCCCTCCTGAGATCTTCACGGCCCAGGGACTCATGCTAGTGGCTGTGATCGCCGGAGCCTTGGGGAAGGCCTCCTCGGTGTACGCGTTGAGGAACGTTTACTTTGGCATCCAGGAGCCCAGACCCATCCGTGTGGCTTTCTCGCTGTCCGGCGCCCTGTTTGTGTTTGCCGGCGTGTGCATCTTGATTCCCATTGGCTGGAATTTGAACTCTGTCCTTCAGAACAAAACCATACACTTTCCTCTTGACTTCCATATGCCCTCTTCTCCCATGAAACAGGAGCCCGGGGCAGCCATTGGGGTTGGCATAGCTGCCTTGGTGCTGTTGATTTTAAGTGGGCTGCTTTTTTACGTCTACGAGTTCCCGGAGAAGAAGCTAGCCAGTGTCCAGCCCTTCTACAAAAGTACGGAAGACGCTGATGTTTTAAGTCTGAGATCTTCCTTTTCCTCCAGGCCCATATCGGCTGTTAGCAGAGACTTATGGCCTTCCTGTCACTCAGTGGACAATCCAGCTTTCCAGTCACAGGAGCATTTATACAGTTAA

Function

GO: NA

KEGG:

id description
K06087 CLDN; claudin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014183 True 792 mRNA 0.54 1 3558918 3559709

Neighbor

gene id symbol gene type direction distance location
AMCG00014182 NA coding upstream 4184 3527017 ~ 3554734 (+)
AMCG00014184 NA coding upstream 47260 3489479 ~ 3511658 (+)
AMCG00014173 rbbp7,LOC105893332,LOC108438657 coding upstream 86930 3462068 ~ 3471988 (+)
AMCG00014176 NA coding upstream 106428 3434157 ~ 3452490 (+)
AMCG00014175 NA coding upstream 149811 3398291 ~ 3409107 (+)
AMCG00014188 NA coding downstream 22910 3582619 ~ 3582945 (+)
AMCG00014187 NA coding downstream 35386 3595095 ~ 3615081 (+)
AMCG00014186 clcn4 coding downstream 57518 3617227 ~ 3629082 (+)
AMCG00014192 msl3,LOC106574410 coding downstream 373549 3933258 ~ 3950277 (+)
AMCG00014194 NA coding downstream 487262 4046971 ~ 4081904 (+)
G68189 NA non-coding upstream 75269 3410978 ~ 3483649 (+)
G68167 NA non-coding upstream 183129 3375585 ~ 3375789 (+)
G68166 NA non-coding upstream 183770 3374837 ~ 3375148 (+)
G68153 NA non-coding upstream 330792 3226859 ~ 3228126 (+)
G68151 NA non-coding upstream 332419 3224574 ~ 3226499 (+)
G68292 NA non-coding downstream 394657 3954366 ~ 3955265 (+)
G68317 NA non-coding downstream 524054 4083763 ~ 4083964 (+)
G68374 NA non-coding downstream 733617 4293326 ~ 4293526 (+)
G68376 trappc2 non-coding downstream 735108 4294817 ~ 4295819 (+)
G68422 NA non-coding downstream 941155 4500864 ~ 4550002 (+)
AMCG00014146 NA other upstream 848589 2706840 ~ 2710329 (+)
G67896 NA other upstream 1428773 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 1656231 1900220 ~ 1902687 (+)
G67801 NA other upstream 1677877 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 1720793 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 567767 4127476 ~ 4131718 (+)
G68475 NA other downstream 1089491 4649200 ~ 4651964 (+)
G68830 NA other downstream 3786486 7346195 ~ 7349467 (+)
G68848 NA other downstream 3853931 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 3904794 7464503 ~ 7482560 (+)

Expression


Co-expression Network