AMCG00014184


Basic Information

Item Value
gene id AMCG00014184
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 3489479 ~ 3511658 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014184
ATGGCGAGCCGGCGCGGCGCTCAGACTCGGGCATCTGGGCCGGGCCGGACCGGACCGGCGGGTTTGTGCGGGTCCGCCGATGCTGTGCACACAGTGTCTCACGCCGAGGTGCAGTTAGTGCGCAGACCTAGACACAGCATGGACGCGGTGGATCACAGAGCCGAGCACAAGTTCGCTGGCAAGAACCACCGGCCGGTCCAGGGCATTGTTCACCAGGAGGTGCAGATCCTGGGGGGTCTGGAGCCCAGAGGCGGCGATGGCGAAGGGGGCAGGCTGCTGGAGGTGGTCCTGTCCGGCGGGGCGCCCTGGGGATTTACTCTGAAGGGGGGTCGGGAGCACAGGGAGCCGCTGCTCATAACCAAGGAGGTAGTGCGGGACCCCAGGCCTCTGCAAGCGCTTGACATGCGGcattcctccctctctctggggtCTTTCATTAATGCGGACTCCAGCTGTCAAGCTGCTGTGAAAGAATTCGAGCTCCGATTAGTTTTTTGTCTCTCCCCTGAGATGCTGGAAGAAAGAGCAGCAAGGAGAGAGTTCGAATCGGCTGATTGCAAGATCCTGAGGGTCTCCCCCTCCCCACTGTGTGAACGGGCGGGGCCTGCGCCGGACCCCCCAGGACTCTGCAGTGACTCTCTCGGCCCACCGGAGGACCGGGGCTGCAGTGCTCCGTGCAGGTACGCTCCCAGTACGAGAGCCGCTTACTCGCTTAAACTCTGTAAACCTCGGGATTACGTGATGAAATCCATCACCGCTTCCCCTATCGATCTTAACTGGGACAGGGTTTCCATGGGATGTGACTGGTTTGTCACTGTCGGTCTTATGCGGCCTGACCTTGGCGTCCATATGTTCAGGGTGGAAGAGGGAAGCAAGGCCGCGTCCGTCAGGCTGCAGGCCGGTGATGAGATCGTGGGCATCAACGAGGTTCCCCTGAGTGGATACAGGCAGGAGGCCATCTGCCTGGTCAAGGGCTCCCACAGGACTCTCACACTGGTAGTCAAAAGACTCCAGAGCTGA

Function

GO:

id name namespace
GO:0007267 cell-cell signaling biological_process
GO:0198738 cell-cell signaling by wnt biological_process
GO:1905114 cell surface receptor signaling pathway involved in cell-cell signaling biological_process
GO:0016055 Wnt signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014184 True 1020 mRNA 0.61 8 3489479 3511658

Neighbor

gene id symbol gene type direction distance location
AMCG00014173 rbbp7,LOC105893332,LOC108438657 coding upstream 17491 3462068 ~ 3471988 (+)
AMCG00014176 NA coding upstream 36989 3434157 ~ 3452490 (+)
AMCG00014175 NA coding upstream 80372 3398291 ~ 3409107 (+)
AMCG00014174 LOC108425737 coding upstream 92356 3391607 ~ 3397123 (+)
AMCG00014170 NA coding upstream 111206 3377692 ~ 3378273 (+)
AMCG00014182 NA coding downstream 15359 3527017 ~ 3554734 (+)
AMCG00014183 NA coding downstream 47260 3558918 ~ 3559709 (+)
AMCG00014188 NA coding downstream 70961 3582619 ~ 3582945 (+)
AMCG00014187 NA coding downstream 83437 3595095 ~ 3615081 (+)
AMCG00014186 clcn4 coding downstream 105569 3617227 ~ 3629082 (+)
G68189 NA non-coding upstream 5830 3410978 ~ 3483649 (+)
G68167 NA non-coding upstream 113690 3375585 ~ 3375789 (+)
G68166 NA non-coding upstream 114331 3374837 ~ 3375148 (+)
G68153 NA non-coding upstream 261353 3226859 ~ 3228126 (+)
G68151 NA non-coding upstream 262980 3224574 ~ 3226499 (+)
G68292 NA non-coding downstream 442708 3954366 ~ 3955265 (+)
G68317 NA non-coding downstream 572105 4083763 ~ 4083964 (+)
G68374 NA non-coding downstream 781668 4293326 ~ 4293526 (+)
G68376 trappc2 non-coding downstream 783159 4294817 ~ 4295819 (+)
G68422 NA non-coding downstream 989206 4500864 ~ 4550002 (+)
AMCG00014146 NA other upstream 779150 2706840 ~ 2710329 (+)
G67896 NA other upstream 1359334 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 1586792 1900220 ~ 1902687 (+)
G67801 NA other upstream 1608438 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 1651354 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 615818 4127476 ~ 4131718 (+)
G68475 NA other downstream 1137542 4649200 ~ 4651964 (+)
G68830 NA other downstream 3834537 7346195 ~ 7349467 (+)
G68848 NA other downstream 3901982 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 3952845 7464503 ~ 7482560 (+)

Expression


Co-expression Network