AMCG00014191


Basic Information

Item Value
gene id AMCG00014191
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 3807265 ~ 3831283 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014191
AGGGAGACTTTACCTGGAACAGCATGTCCGGCCGCAGCGTGCGACTAAAGCCCGTGCCGATCCAGAGTCTCTCTGAGCTGGAGAGAGTGCGTCTGCAGGAAGTCGCCTTCAATCGGCTGCTGCAGGACTATGACCTTGGATGCCAGATAACGATCCCCAAAGATGGTCAAAAGCGTAAGAAATCGTTGAGGAGGAAGCTGGATTCATTAGCCAAAGAGAAGAACAAAGATAAAGAGTTTGTGCCTCAGGCATTTGGGATGCCACTGTCCCAAGTCATAGCTAACGACAGGACCCACAAGCAGAGGCAAGATTCCCAGAGAGAGGAGCAGAAAGACTCCACTGACCTGGTCTCCTCCATCCTGCAGTTTGCCGCCAAGAGGCCGAACAAAGAGCTCTCCAGTAGCAACTCATCTCTCAGCTCGACGTCGGAAACGCCCAACGAATCCACGTCCCCCAACACCCCTGAACCGGCCCCGAGGGCGCGGAGACGGGGTGGGATGTCCGTGGACTCGATCACGGACCTGGACGACAATCAGTCTCGGCTCCTGGAGGCCCTGCAGCTCTCACTCCCAGCCGAGACGCCGAACAAGAAGGAGAAGCAGCGAGACAAGAAGCTGAGCTTGAACCCCATCTACAGACAAGTTCCCAGGCTGGTGGACAGCTGCTGTCAGCATCTGGAGAAATACGgtctTCAAACCGTTGGTATTTTCCGAGTAGGAAGTTCGAAGAAGAGAGTGAGGCAGCTGAGAGAGGAGTTCGACCGCGGGGTGGACGTCCAGCTCGATGAGGAACACAGCGTCCATGACATCGCGGCGCTGCTGAAGGAATTCCTGAGGGACATCCCCGACCCTCTGCTGACCAAGGAGCTGTACACGGCCTTCATCAACACGATGTTGATGGATTCTAACGAACAGCAGTGTGCTCTACAGCTTCTCATTTACCTCCTACCTCCCTGCAACTGTGACACGCTGCACAGGCTGCTGGAGTTCCTGTCTACGGTGGCGGCACACGCTGATGACACGTGCGATAAAGACGGCCAAGAGGTCACTGGGAACAAGATGACATCGCTCAACCTGGCCACAATATTCGGTCCCAACCTCCTGCACAAGCAGAAGAACTCAGACAAGGAGTTCTCTGTCCAGAGCTCCGCGCGTGCCGAGGAGAGCACCGCCATCATCGCCGTGGTCCAGAGGATGATCGCCACCTTTGAGGCTCTGTTCATGGTGCGTAGCCGGGGGGCAGAGGGGCGCGCGCTGTTCCTGACACTTCCAGGGGTCCCCCCCGATCTACAGAACGAGGTCCTGATGAGTTTACTGGAGACGGACCCCGATGTCGTGGACTACCTGTTGCGCAGAAAAGCTTCTCAATCCTCGAGTCCCGATCTGGCAAGCTCAGAGGCGGCGTTCTCCCTGGGGGATCGGCACTCCTCCACAGACTCCAACAAGGTGTCGAGCGGGGAGGTGTCCCCCTACGACAACAACTCTCCCGTGCTTTCGGAGCGGCTCTCCTTCCAGCGCCAGGAGGACTTGGTCCCCGCCTCAGAGAAGCTCTTCAAAGTCCCTGAGCAGTACACGCTGGTCGGACACCTCAAGAGCAAGTCCAGGGAGCCCATTGCGGGACAGTGGGCTGGCAAAGGCTCTCATGGGAACGTGTGTGACTGCGGCTCGGGGCAGGACGGTTCCTCCGGCTCTCCCGGCAGCCCCACGCCAGAGTGGCCCGAGAGCCCGGCTTTGGGCAACAGCAAGCAGCCGGTGAGACGGACGCAGACCACGGCCGGTGTCCTGGAGTGCCGTCCTCACCCCCCCGTCACCAGGGCCAGCAGCAGCCCTCAGGCCGGGGGGGGGCGAAGACACGGCCAGCCGAGCCTCGACTCCCCGCACTGCCGGCCGGAGGGCTGCTCGGCTTCCAGCAGCACCGAGGACGTCCCGCAGAGGAGCGCGAACCCGGCCAGCCTGCAGTTCAGACCAAAGCCGGCGTACGCCCAGCTCGGAGACATCAGCCAGAACGAGAGCAGGCCTCCCCCGCCGTACCCCGGACCCCCCAGGCAGGCGCTGACCGGCACGCCGCCCCCCCCGCAGCCACAGCGGTCCACCTCGCCGGCGCCACAAACTCAGAGACGGCTCAAGCATGAGGCCCCGGGGCTTAAAACCGCTCCGGCAGAGCTGCCCAGGATGAGGTCGGAGCTGAGTGCGGCCCCCCGGAACGAGCCCCTCAAGGTGCCCCCCGGCTCCCCGGGTGGCCAGAACAATAGGAGCAGGGCCGGGCCCGAGTGGCAGGACTGGCAGAGGGAGAGGTGGCAGATCTGGCAGCTTTTATCGACCGACAACACGGACACACTGCCAGAAACGCTCGTATGAACTCGGACAAATGTGCTACGGCCCGAGAAGACATTGTGATGGGTGCGTGGGtgcgagtgtgtgagtgtgtgtacagAGTTTTGTATTGAAGGTAGCGTCCTgccgttttttattttaaatatgccactgtttgtattacattttttactttatcGTGTCATGACATTTCAACCCTGTATCTAGTTCATGGTGGGCTTAACTGTCATTGAGAGATACCTCAAAAAGAAACCgaagtaaatgtgttttacaatacTTAATTAtagatacatacaatatatgttATTGTTATGGGAGGTTTACACGTTCACATTCAGTCGTAAAATCTGCCTTAAtgccaaaataaacaattaattacaaaGGCTGTGTAAATATACCTGTAAGTGTATATTTTGGAGTGTGTAGTTTAAGTTCTATTACAGCACCGTTCTCCCCATCCTTCTCACAGCCTGAATCCCGTGTGTTTGGTGTGAAACAAACACGATGGACCTGAACCGTGCACAATGTTGTGAGCACTGCTACACAAAGCCGCGCTCAGGACCTACAGAGTACAATTGTGGAAAAACGTGTCTCTCCGCCCGACGGCCAACACGGAGTCTGTCCTTTTCAGAAACGGAAACTTTGTAACACGGCTTTGTTCTCGGTGACATCAAGACTTAATTCCAGAATCCCAACTTAACTGGGCCCTTTGATCATGTTATAAatgttgccttttctttttatcctAGTCCCATCTTTAATGTCTTGAGGTATCGTTCCCCACTCTCTCACGCGTGCAGATTTGGAGAGGAAGGTGCTTTGTGAGCCGGTGTGTTTCCCGTGGCCTTAACTCTGCGTTCGTCAAACGGACCGAAGAACTAAAGCTGTGCTGAATGTTTTATCATGATTGTAAAAACTATTCACAAATACTTTTAAGAGTGTGGAGTGTTTGACCCACTGATCCGAGTCCCTTTGTTTATTAGAGACGCAGAGGAAGTCCGGTTCGAGGACGACggacagaaatgaaaacaatataagaGCCTCACAGTTCCAGCGGCCTTTTCTTCTGTAAAGAATTTAGCTGGATTGTCTGAAAACGaggattcattttttattcttaaatatcAAAGAAATCATCTAGCTTTAATGTTGTCTCTCAATACGCAAGAGAGCTCTTCTGTGTGTGTCATATTTGTCTTTGGGTCGATGAGTTCAACCCACCGAGAAGATGTTGAGGAAGCCGATCGAAGGGGaatgtatttacagtgtctTCGGTACTTGtcaataaataacttatttttacgGCTGCTCGGTTCTAATTGAATTCACAGAAGATGTTGTGCTCCGTTGTGGGGATTCGGGTTTTGACGTCTAAAGACAGTTAGGGATATTCAGACAATTTAGACCTTGTGTTGCCATGTAcagatgtattaaaataaagtaaatgtgtatatatatgtatatatatgtatatatatatacattttgtagtcATTTCACAATATCTAAAAATGTCTTAAGTGAAATTGTATGTATCGATCAATGTCTGCATTCatcttgaaatatttcaatatcTTGAATCTGGGAATATATCTGAAAGGCGTGTTCTGATTGGCACAGGTGTCTTTTAGGAAACCGGACACTATGTGCTGGGTTTGAACTTGGAAGATCCACAGACGACAAATCTTTGCAGAATGATTGTCGGCCAAAGCTACGGGGAATGTACAGAGGTCTATACTGTCTATACATGGACAGTGTTTATATGCAGTCATTTCAAATGGTGTGTATTCTGAAGTTGTCATTTTGTGATGCTGTACTGtgatcttaaaaaacaaaatccatgaGTGATCGACTGTTTCAATaatattgcacttatatttgtTGACAAAGTAACAAACCAGAGTGTCTGTGCTTTTATACAGGAATGAAAACATTCCGGAGTACAAAGTTgctacttttgtttgtttgttttttaattagaaatgatATACAGTGGTCTGCAAATTAATTGTGATGCCTCAAGTTTGATCTTTTATGAAActgtgaacaaaaacaaaaagtctttGCCCTTAGTAGATGAATGAGTCATTTAATTTGTGCAGGTATGTCTTATATCACACTAACTCGATTTAAAACAGTTTGGGTATCTTCAACATTGATATTTAGTCCAGCCTTCAATAACATCTGGGTACCTCTTTGGTATCGTCTATGTCATGTCTTAAGGTATCTAATATAATTTGATCCAGATGTTCTCAGTGTTTTAATTACGCACCCTAACTTATAACGCATTCTCAGGCACTTGACCATTTTTGGCTTTACATTCCTTTTCtcttaagattaaaaaataattatgtctAGTCTATTAATTAAAGTCCAAGATAGAATTAATCAAATCCTTAATTTATCACTTTTgattttccaacattttacagaattgttgtctaatacatttgtgaagtactgtatacagtattatACTATATTTCTGATGTTCAAAATACAGATGTGGGCATCATTTTGCTTACAAATACAAGCTTTCCATATCAAACCCGGGAAATTGTGAGAAATTAATCCAGGACACACACAAATGCTCTGAGGATTTCCATTGTATTGCAGTGAATGCACTGtatcttgtatttttaatatttatttatctcattgccattgttcttgttttgctttgttgcaAAGGGTGTGCAAACATTTGTCCACAACTATTTATCTATGTATAAAAACTTCTGACACTCttgatgtgttaaaaataaataaaactaccaAGTGTTTAATATAATGAGCTGGTGCCACTAGTTCAGGATTTGTATATAGACTTCCAGATTTGTACCATTAAGCATTCAATTCAATGTTTCAGCCTGCAAGCACACTTAACACAACGAAACGGTACGACGTTTTAAGACATCTAAACACAGATCCATGTTCACAGTGAAAGGAATTGAGAAGGACAGCCTAAGATGGTGTTTTGGTGGGTTTAAGTAcatgtacagatttatttttcactgaaatATTTGTTGACAGCTTGGAATGGTGCCTcgtcattgttttctttttggagaaatgtataaactggaaaaaatgtatatgacaAGTTAATTATTCAAAGACACTTAACGATCATGGATTCATCTTCACCCCCAATCAAGTTTAATTTATCTACTGACACTCACTGCCAGGATTAGCTATGTTGTCAATTAATGTGGCTTATTGGTGTGTATATGGTTCATAAACCCCCCAAATGTTGCTGCATAGCAAAATCATTTCCTTCTAATGTTGTAATTTAATAAGGGATGTTAGGTTTTGTACTTTGtgaactaaaatgttttttgttcagtgttttaatatatatatatgtctttattttaaatataaatatatttgtatggtCTGAACTTCATCTGCGAAGGTTATGTGTATTATGTCTTACATAAGCCATGATggaataaattgaaaataaagctgC

Function

GO: NA

KEGG:

id description
K20631 ARHGAP6; Rho GTPase-activating protein 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014191 True 5808 mRNA 0.46 11 3807265 3831283

Neighbor

gene id symbol gene type direction distance location
AMCG00014189 LOC106581913,LOC105898087 coding downstream 106504 3700069 ~ 3700761 (-)
AMCG00014190 LOC106581913,LOC105898087 coding downstream 129009 3657077 ~ 3678256 (-)
AMCG00014185 NA coding downstream 233818 3566511 ~ 3573447 (-)
AMCG00014177 LOC106574796,LOC106593175 coding downstream 319439 3480349 ~ 3487826 (-)
AMCG00014179 NA coding downstream 327895 3471921 ~ 3479370 (-)
AMCG00014193 NA coding upstream 83579 3914862 ~ 3921315 (-)
AMCG00014203 NA coding upstream 462618 4293901 ~ 4297462 (-)
AMCG00014205 gpm6b,LOC105898107 coding upstream 488911 4320194 ~ 4325828 (-)
AMCG00014206 gemin8 coding upstream 551320 4382603 ~ 4382845 (-)
AMCG00014204 NA coding upstream 552862 4384145 ~ 4389193 (-)
G68224 rbbp7,LOC105893332,LOC100695351,LOC103023991,LOC106520888 non-coding downstream 342473 3463435 ~ 3464792 (-)
G68162 NA non-coding downstream 579115 3226865 ~ 3228150 (-)
G68124 NA non-coding downstream 774501 3029109 ~ 3032764 (-)
G68077 NA non-coding downstream 1002101 2776259 ~ 2805164 (-)
G68304 NA non-coding upstream 125719 3957002 ~ 3957266 (-)
G68324 prps2,LOC108413289 non-coding upstream 264932 4096215 ~ 4098475 (-)
G68325 NA non-coding upstream 268281 4099564 ~ 4099927 (-)
G68336 NA non-coding upstream 274235 4105518 ~ 4129741 (-)
G68386 NA non-coding upstream 467022 4298305 ~ 4299684 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other downstream 412511 3385757 ~ 3394754 (-)
G68088 NA other downstream 978121 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 1154018 2641059 ~ 2653247 (-)
AMCG00014134 NA other downstream 1264568 2531954 ~ 2542697 (-)
AMCG00014119 NA other downstream 1682312 2085941 ~ 2124953 (-)
AMCG00014228 NA other upstream 1827789 5659072 ~ 5678499 (-)
AMCG00014241 NA other upstream 2228206 6059489 ~ 6108358 (-)
AMCG00014271 NA other upstream 3546805 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 3570869 7402152 ~ 7411890 (-)
AMCG00014278 NA other upstream 3582446 7413729 ~ 7423291 (-)

Expression


Co-expression Network