AMCG00014195 (prps2)


Basic Information

Item Value
gene id AMCG00014195
gene name prps2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 4088363 ~ 4098941 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014195
GGGGTCGTATAGGTGCCACTGTGTCACTGCAACACTAACACCACATTGCAAAATCAAGAATATTATGATGGCTTTAAAGACGCGTGAGCGGAGGGCGGGCCGGGGGCAGGTCTGGACGCATCATTTCCTCTCCCCCACCCCGGCCTCCTTCCTTCAAGACCGCAGCGAGAGCAGAGCTGCTACCGACAGCGGCGGCGAGAAAGACAGTGGCAAGGAGGCCGACTTTGCAACTTTCCctctgcttgttttgtttttgcattgtttttgtatcCTTTCCGAAGTGtagttgtatatatttattttatccgACCATGCCGAACATCGTGCTTTTTAGCGGCAGTTCCCACCACGACCTGTCACAGAAAGTAGCAGACCGGCTCGGGCTGGAGTTGGGCAAAGTGGTCACCAAGAAATTCAGCAATCAAGAAACGTGtgtgGAGATCGGGGAGAGCGTGCGAGGCGAGGATGTGTACATTGTCCAGAGcggctgcggagagatcaacgACAACCTGATGGAGCTCCTCATCATGATCAACGCGTGCAAGATCGCGTCCTCCTCCCGCGTGACGGCCGTCATCCCCTGCTTCCCCTATGCCCGGCAAGACAAGAAGGACAAGAGCCGCGCGCCCATCTCGGCCAAGCTCGTTGCCAACATGCTGTCGGTGGCCGGCGCGGACCATATCATTACCATGGACCTTCACGCCTCCCAGATtcagGGTTTCTTTGACATTGCTGTGGACAACCTCTATGCAGAGCCGGCAGTTCTACAGTGGATCAAAGAGAACATCCCGGAGTGGAAGAACTGCATAATCGTGTCGCCGGATGCCGGAGGAGCCAAGCGGGTGACTTCCATCGCCGACCGGCTGAACGTGGAGTTCGCTTTGATCCACAAGGAGAGGAAGAAGGCCAACGAAGTGGACCGCATGGTGCTGGTCGGGGACGTGAAGGACCGAGTGGCCATTCTGGTGGATGACATGGCGGACACTTGCGGCACCATCTGCCACGCGGCTGACAAATTGATGTCTGCTGGAGCTACTAAAGTCTACGCCATTCTGACCCACGGTATCTTCTCTGGGCCGGCCATCTCCCGCATAAACAACGCCGCTTTCGAGGCCGTGGTGGTGACCAACACTATTCCCCAGGACGAGAAGATGAAACAGTGTCCCAAGATTCAGGTGATCGACATCGCCATGATCCTGGCTGAGGCAATACGGAGAACCCACAACGGAGAGTCGGTCTCCTATCTATTCAGCCACGTACCCCTGTGAGGTGGAGGAGATGCGCGGACGGGAGTTTTCCTGGTCGGCTTCTGTACGACTCTAGTAGCACCACCCTCGACACTTGGAGGGACCACCGCAAGAGACTAAACGTTCATCTGATCTCGAGTGACATTTCCAGCTCCAGACGTCGCCTCACGGACGGGATTCCTGCGAGGCGAGGCGCTCACTTTCCTGCTTTAAGACCCAGAACACTGAATGTTGCCTTAATTGAGGGGCTTAGTTTTAGTTTATACCTCATGGTGTTTGTATGTTGATGTGAATGAAGAATTCCCTTCGAGTTCCCTTCGTCTTTCGATACACATTGATGGCTTTTGCTacagatttataaatgtataagtaataaacaaaagttgtattttagttttgtgaTTTATCTGCGGGTGAAAGCTATTTTCTCTTAAGTATTGAATCTACCAAATAGTCCTACCCATTCTTAATACGGAATTGAAATGTTTCAGCAGAAGGTCATTTACATTGCTGCGGTCTTCTCCCTGTGTGtcttaatttgtttagttttttggggttgggatattatttttcttcatgctttgataataaaataagcaataaatacaaaatattaatgcggttttgaaataaacaacccaacaaaaaaaatccgATTTTTGGAATTCGGTCCCAAGTTTATTTTACAGGTTAAAGAGAAACAGTtggaaaatgttacattatctTCTTTTGGGGGGTTAGTATTCAAAAGTAGTCACACTTACCAAAGTACTTCATTCTCAAATAGTTTGGGTGGGACTGTAATCTCTGCTTGTGTTACAGATGAGCTGCTTTCTTGTCCTTTTGTTCATTTCCGTTAAATATCTGCTTTCTAGTTTAATTTGTGAGGGGttactttttataaaaataagtaaccaGTAcgtttcattcaaaataaagctGGTTATGTGAAAGATTTGAGTCTTGTTTTGTGGGGGGGAAGTTTAAATCTCACCTGAGCTTTGCATTGTTGGAACACTTACCTTTTCAAATTGCTTTGTAGTAGTCGGTGAAAATCTGCAGTCTCTGAATCTGACTCTTCACATCAATTTAAAGTTATCGGTTAGATGCTTCCTTATTGCCTCGGCTTTTGCACAGGGGACGTCtggttttgttatacataaGTCTATGCTGTTGTAAGCGTAGAACAATGTCTTTTAAgattatacaaataaagatCTTAATTTATTACGTAATGTTAGATCTTCAAAGGATAAGGAGGCCTAAAAACATCCCTTAAAGTCTGCAGCATGAAGGGGTTTGATGCAGGTTACAGTTTAAAGGGCATTATTCAATGATCTAGGTATTTTATGTGAATGCCAGTTTCATTTCTCTTtcgggttgtttttttttgtggcgCTATTTTCACAAGTTActtg

Function

symbol description
prps2 Enables identical protein binding activity. Predicted to be involved in 5-phosphoribose 1-diphosphate biosynthetic process and purine nucleotide biosynthetic process. Predicted to be part of ribose phosphate diphosphokinase complex. Predicted to be active in cytoplasm.

NR:

description
PREDICTED: ribose-phosphate pyrophosphokinase 2

GO:

id name namespace
GO:0009165 nucleotide biosynthetic process biological_process
GO:0016310 phosphorylation biological_process
GO:0004749 ribose phosphate diphosphokinase activity molecular_function
GO:0016301 kinase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K00948 PRPS, prsA; ribose-phosphate pyrophosphokinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014195 True 2665 mRNA 0.46 7 4088363 4098941

Neighbor

gene id symbol gene type direction distance location
AMCG00014194 NA coding upstream 6459 4046971 ~ 4081904 (+)
AMCG00014192 msl3,LOC106574410 coding upstream 138086 3933258 ~ 3950277 (+)
AMCG00014186 clcn4 coding upstream 459281 3617227 ~ 3629082 (+)
AMCG00014187 NA coding upstream 473282 3595095 ~ 3615081 (+)
AMCG00014188 NA coding upstream 505418 3582619 ~ 3582945 (+)
AMCG00014197 NA coding downstream 7243 4106184 ~ 4118772 (+)
AMCG00014199 NA coding downstream 106214 4205155 ~ 4220124 (+)
AMCG00014198 NA coding downstream 124603 4223544 ~ 4227643 (+)
AMCG00014200 NA coding downstream 143869 4242810 ~ 4244022 (+)
AMCG00014201 rab9a,LOC106581920 coding downstream 192003 4290944 ~ 4291549 (+)
G68317 NA non-coding upstream 4399 4083763 ~ 4083964 (+)
G68292 NA non-coding upstream 133098 3954366 ~ 3955265 (+)
G68189 NA non-coding upstream 604714 3410978 ~ 3483649 (+)
G68167 NA non-coding upstream 712574 3375585 ~ 3375789 (+)
G68166 NA non-coding upstream 713215 3374837 ~ 3375148 (+)
G68374 NA non-coding downstream 194385 4293326 ~ 4293526 (+)
G68376 trappc2 non-coding downstream 195876 4294817 ~ 4295819 (+)
G68422 NA non-coding downstream 401923 4500864 ~ 4550002 (+)
G68434 NA non-coding downstream 485533 4584474 ~ 4588428 (+)
G68473 NA non-coding downstream 548769 4647710 ~ 4648213 (+)
AMCG00014146 NA other upstream 1378034 2706840 ~ 2710329 (+)
G67896 NA other upstream 1958218 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 2185676 1900220 ~ 1902687 (+)
G67801 NA other upstream 2207322 1879091 ~ 1881041 (+)
AMCG00014104 cyyr1,LOC107751099 other upstream 2250238 1835432 ~ 1838125 (+)
AMCG00014196 NA other downstream 28535 4127476 ~ 4131718 (+)
G68475 NA other downstream 550259 4649200 ~ 4651964 (+)
G68830 NA other downstream 3247254 7346195 ~ 7349467 (+)
G68848 NA other downstream 3314699 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 3365562 7464503 ~ 7482560 (+)

Expression


Co-expression Network