AMCG00014202


Basic Information

Item Value
gene id AMCG00014202
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 4298341 ~ 4316679 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014202
CCATCGCTGTGCACAGCTGACTGATCCTGAACACAGCTCTACCATCCCGAATACATCCTGAACACAGCTCTACCATCNNNNNNNCATCTCTACCATCCCGAACACAGCTCTACCATCCTGAACACAGCTGACTGATCCTGAACACATTTCTATCATCCTGAACACAGCTGACTGATCCTGAACACATTTCTATCATCCTGAACACTGCTCACTGATCCTGAACACATCTATATCATCCTGGACACATCTCTATCaccctgaacacatctcagtcATCCTGGACACATCCTGAACACAGCTCTACCATCCTGGACAAGATCAATGCACAGACTGCGGAGCTGGACAGGTTGAACATGGCCGCTGCTAAAGAGGAGATGATTTCACCCGATGAAATGAGAAAAAGGCTTTACCAGACTTTTAAGACTCGTGGTACGCAGCTCCGTAACCAGCTCATCCATGAACTGAAGCACCCGGTGCTGAGCGCAGAGGTGGCCCCCAGGCTGGTCCAGGCGGAAGCAGATTCAGTCTTCGTTCGAGCCTCCAACAGTCTGGTAGCGGATCACCTGCGCAGAGCTGGCTATGAATACACCCTGTCCGTTTTCTACCCTGAATTTTTTTTCTACAAGGGACCTTCTCCAGCTGATGAAGATCAGTCCTCGGTCAGCCCTCTACAAATCAATCGTTTTATGATGACTTTGCTCATCCAGCTGACGGACGATTACCTGAACAAGCAGAGCTGTGATGCAGAAACACAGACCGCCGCGACTCTGCAGTGCAGGGAATCGCTGGATATTGAGGTGGCCAAGCTGAAAatggaggagagggagaaatcGGAGAGAGAAATATCGGCGCTGAGGCGGGAAATTGAGAGGACCTACCAGAGCAAATCCGAGGCGCTGATAAGCCGGGAGAAGAACGCAATTGAGCGGCTGCAGAGACAGCACGAGATCGAAGAAAAGGACAGCTACGCCCAGAGACAAGCGCTGCTGAAAGAGATTGAAATCGTGAGGAGCAGAGAGGCAGAACTGAACCAGAGAATAGAAGCGTTTGAGATGAATTGCAAATTGCATGGAGAGAAGAACAGGGTTTCGGAGGAGGCTCTGAGACGGCGTGAGCTCGCGGTGAAAACCATCGAAGACACCTATGAGCAGCGACTGAAGAACGAGCTGCTCAGATACCAGCTGGAATTGAAAGAAGAATACcttaaaagaacagaaaaagtCACAGAAGATGAGAAAACGAATAAAGCTGAAGGCATTCGATTGCGGAAGGAGCTGGCGGCGATCAATTCCATGACGGAGGAACACAGACGGGCCTCTGCTGAGATGAAGCGCCTGCAGGTGGAACTGGACACGGCCCTGTCACAGATCTCTCTGCTGACGCAACAAAACAAGCTGCTCAGAGAGCGGCTGGAGGAGACGGCCGACTACCCGGCACTGAAGAGAGAGTGGCTGGAGCTCCAGGCCCAGCTCAGGCTGATGAAGAAAAACCTCGAAGAAGCTCAGGATGACAATCGTCATCTGAAAACAGAGTACCTGACTCTGCAGGCCGAGCTGAGGAGAGTGGAGAACTGCAGGAAGCTGGACGAGGAGGAGTTTGAAAGTCACAAACAGCTACTGGAGAGGCAGTTACAGAACGAGGTGGAGCGCTCGGCTCACCTGAAGACCCAGCTCCTGGAGTGCGAGGAGCGGACGCGGTGGCTCACCATCCACGCCGAGGACGTCAAAATGCAGCTGCGCCAGACACAGCTGGCTCTGGAGAACGAGGTTTTCCGCAACCCCAAGCCCTCTCTGGTCGACCGCTCGGTGCTGGACCTCAGTACTGACAAGATCGTGCCCCCTGACATTTATGTAGACGGGCCTTTTCTCCGGTCGGCGCACAACGGCTTTCTCTTTGACCCCGAGGGCCCTCCGAGACGCGGCAGGGCCCGCAGCGGCTCCCCGGACTCCGACGCCGAGCTGGTTGCCGAGGCCAAGGCAGGGATCagggagctggagaaggaggCTGAACTTCTGGAAGAGGCCTACAGGAACTACCGGCACCGGGCTGCCCTGATGGGTAGCAAGCCAGCAAAACCGCAGTCGCCCCAACAGCAGCCTTTCGGTCTCTGCAACCGGATCCCCTCCATCTCTCACCACCGAGTGACCTTCGCGGAGGAGACACCTCCTCTCCAGGACCTGGACTCGTTCCCTCTCAACGGAGCCGCGCTGGCGGAGCTGCAGAACCCGTACGAGGAGAGCTCCCCACGACAGCGACGCCTCTCTTCAACGCCACTCTCGAAGTCCGAGCGGCGGATCATGAAGAGGTCCACTGAAgATGAACTCCATTCCCATGATGCATCGGACTACCACTTGTCCGAGCGGCAGCTGTCCCCCATCCCTCCCCGAGAGCTCCCGTCCTCCTTCGCCTTGGCGTCTGAGCTCAGTCCCCCCGGCAGCCCTCCTTTGAGAAGCACCGCTCGAGAGGGCAGCAGTTCCCAAAAACAGCACAAAGATCTGTCCAGCTCAGGGTCTTCACCTCCTCCTGAAATCATATCCCTGCAGGACCTCACTGAACCATCAAGAGATCACAGCGACGTTGCCCAGCGGCTTGAGGGCCCCGCGCCCCATCCATCTGCCCGGGACGTGAATGGGCGCAGTGTGGCGGTGCCAGAGCCAGCGGATGGCACTTCGGAGCGAGGCCACGGACACGACGACCCAACCACTCCAGAGGACGATGGGCCgagagatgaggaggaggagagacgaTGGCAGCTGGAGAGGAAGGGACGCACAGAGAGGCGACTGCAAGAGAGACGGGAGGCCATGGCAAGGGAGCAGAGCGAGTTGGAGAGACTGGAGCAGGAGAGGCTCTCGGACGAGGCGCAGCAGCAGCATGAGCGCGTGGAAGAGGAAGTGGACATGGAGCCCAAAACAGAAGCCGAAAAGTCTGCCTCGATTGCTGATCCTCTGGAGAAGTACATGAAGATCGTCTTGCAGAACCAAGGACAGAGTCAGCAAGGacagAGTCCGGCAGAAGCAGCGCGAGAGCAGGAGAGCTCGGAGGCGGAAATACGGTCCGACGAGAGAGATGACAGcATCGCCGCCTTCTCGCATGAAGACGCCGACGAAGACTTCTGGTGAATCGGGCGTCCCGGATGCCCATGggtgaaaaatgtatgtacgtgtgtgtgttgtacaatGTCTGTAACACTGTAATTGTCCCTCTTCAGTGCTGTGTTGGTTTGTataaactgatgttttttttaacctgatCTTTGCGTTTAATCCACCCTGCAGTATTGTATCAAttggagtgtttatttttataacaccTCTGTGCTGTGGAAATAAAAGTCATGTC

Function

GO: NA

KEGG:

id description
K16480 OFD1; oral-facial-digital syndrome 1 protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014202 True 3342 mRNA 0.55 22 4298341 4316679

Neighbor

gene id symbol gene type direction distance location
AMCG00014201 rab9a,LOC106581920 coding upstream 6792 4290944 ~ 4291549 (+)
AMCG00014200 NA coding upstream 54319 4242810 ~ 4244022 (+)
AMCG00014198 NA coding upstream 70698 4223544 ~ 4227643 (+)
AMCG00014199 NA coding upstream 78217 4205155 ~ 4220124 (+)
AMCG00014197 NA coding upstream 179569 4106184 ~ 4118772 (+)
AMCG00014207 LOC108443135,LOC102799111 coding downstream 144096 4460775 ~ 4498956 (+)
AMCG00014209 NA coding downstream 204123 4520802 ~ 4548407 (+)
AMCG00014208 NA coding downstream 251990 4568669 ~ 4583209 (+)
AMCG00014213 anos1,LOC104963477 coding downstream 406975 4723654 ~ 4746002 (+)
AMCG00014214 NA coding downstream 521044 4837723 ~ 4851433 (+)
G68376 trappc2 non-coding upstream 2522 4294817 ~ 4295819 (+)
G68374 NA non-coding upstream 4815 4293326 ~ 4293526 (+)
G68317 NA non-coding upstream 214377 4083763 ~ 4083964 (+)
G68292 NA non-coding upstream 343076 3954366 ~ 3955265 (+)
G68189 NA non-coding upstream 814692 3410978 ~ 3483649 (+)
G68422 NA non-coding downstream 184185 4500864 ~ 4550002 (+)
G68434 NA non-coding downstream 267795 4584474 ~ 4588428 (+)
G68473 NA non-coding downstream 331031 4647710 ~ 4648213 (+)
G68497 NA non-coding downstream 468647 4785326 ~ 4785601 (+)
G68509 NA non-coding downstream 540350 4857029 ~ 4857230 (+)
AMCG00014196 NA other upstream 166623 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 1588012 2706840 ~ 2710329 (+)
G67896 NA other upstream 2168196 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 2395654 1900220 ~ 1902687 (+)
G67801 NA other upstream 2417300 1879091 ~ 1881041 (+)
G68475 NA other downstream 332521 4649200 ~ 4651964 (+)
G68830 NA other downstream 3029516 7346195 ~ 7349467 (+)
G68848 NA other downstream 3096961 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 3147824 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 5686379 10003058 ~ 10008648 (+)

Expression


Co-expression Network