AMCG00014211


Basic Information

Item Value
gene id AMCG00014211
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 4560163 ~ 4565944 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014211
TTTGCAAAGTTgcagctgaaaacaaaaaccatttGGGCAGAGTCAGAGCTGCAGGCACCAGGGCTGGGCTACAGCACGACTCCCTGTTTATCTTCCCTGAAGTTCATGATCCTGGTGCTTCCAGTGCAACAACATGAAGAGCCTTTAACAATCCTGGCACTCGAGACGCTGAACTGAGAGCCGTTGTCTTCTCTGCTGTCTGTACCTGTGCGTGGCGAAGACACAAAGTTCAGCATGAATCCTGAGCCGGGCAGCACAGACAGCCAGCAGCCCCAGGCTACCCGAGCCCGGCCATCAGATGACTACTTTTCCAACCCACTGATGAGTGATTTCGAATCTGATTGGTCTCCGATTCACGATGCTGCTTTCCAAGGGCGCCTTCTTTCCCTGCGCAGACTCATCGGCCAGGGCTGCAGTGTGAATCTAGCGACACTGGACCGAGTGACGCCTCTGCACGGGGCTTGTCTGCAGGGACACATTGCTTGTGCAAgacttttaatacaaaatgggGCAAATGTGAACTGCGCTGCTGTGAGCTGGAACACCCCACTGTCCGACGCCTGCGCTGGGGGCAGAGTGGGCTGTGTGGAGCTGCTGCTGAAGCATGGGGCGGACCCCCGGGTCAGCGACCTGGCATCCCCCCTGCACGAGGTGGCCAGGAAAGGGGCCAACGTGAACAGCAGTAAAGACCTGGATTCGCCGCTCCACGCAGCCGCCAGACACTCCAGACTAGACTTAGTCCAGGTGCTCCTCAATCACGGGGCCGACGTGACGTCCAGGAACACCGATGGAAAGCGGCCTGTGGATCTCGCTGCTCCTCACAGTGACGTGCAGAAGCTCCTCCTGCAGAGAGAAGGACCCCTGTCTTTGGCGCAGCTCTGTCGTCTTTCTATTAGGAGTCTTTTGGGGAGATCAAGACTCAGAGAAATATCCGGACTGCCTGTTCCAACTGAACTGAAACACTTTCTGATGTACAAGTAGAACTACagacatttgattttgttttgacgGAAAGCTATctttttataatgatatataaatgCCTATTAATAGTACAGTGTGATGTGGTTCACATCCTGTAATCTTCACCCAGGGAGAGAATGGAAGATGATACAGTTTAACTATTAAACATATTGTCTACTTTATTTGATGCTGGTTTGATGATTTTTAAAGGTGCTACctgttgcattttccttttgaaagcaaacaaattattacaaaatccCTATGATATTACAGTTTCCAAGGAATCTATTTCTTACAGCCTGATTTATGTAAATAATCTTGCATTGAGGCAGATATAACATTGCAAACTCCATCAGTCATGAGTTGAAAATTGTGCAGCACTCATTTCAGTCAGTGACTATTCTTGAAACTAGAATAAAGGGTCAGGATTTGAACTGGGATCTTAATCAATAGTgactgttgctgttttgtttctgttttgtcttgCCTTTGTTGACCACCCTTGTTTGTTAAGGATTGTTGatcaattaaactgaaaactgtTTCCTCTTCCACGCCCTTTTGAACACGGAAAGCCACAATATTCCCAGGCCTTGTGGACAGTGAATTCTTGGTGGCAGCAGGTGGAGCTGTTGCTTCATGGGAACAGAAAGAGGGAAATCTCCAAAACCAGGGAATCATATCAAACCACCAGCGGCTCCTTCAGCGATACCATGTGATACAGTGATGTACAGAAACGTGGAGAATTTAACTTTGTCATCCCACAGGGCCCGGGGTGTGTTGATTACTGCTTGCTGTCAACTAAAGCAAGATTACTTAATCACATTCATACCCTGGGTACCTCAAAACAAGCTTCGCGATTCGGCATATAGAGACTGCCCATCAGATGgcaagataattaaaaacatcatgATTGGTTCCTGGCTTTGAATAAAGATGCTTTCTTTCACGTTTCACAGAGTGTATTGGAACAATCCCTGTACTCCAGTCGATATAGTATTTACAATCCCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014211 True 1979 mRNA 0.47 6 4560163 4565944

Neighbor

gene id symbol gene type direction distance location
AMCG00014210 NA coding downstream 39764 4511821 ~ 4520399 (-)
AMCG00014204 NA coding downstream 170970 4384145 ~ 4389193 (-)
AMCG00014206 gemin8 coding downstream 177318 4382603 ~ 4382845 (-)
AMCG00014205 gpm6b,LOC105898107 coding downstream 234335 4320194 ~ 4325828 (-)
AMCG00014203 NA coding downstream 262701 4293901 ~ 4297462 (-)
AMCG00014212 tbl1x,LOC106582098,LOC102307724,LOC101465000,LOC102798223 coding upstream 22453 4588397 ~ 4605961 (-)
AMCG00014215 NA coding upstream 293313 4859257 ~ 4864318 (-)
AMCG00014227 NA coding upstream 1078908 5644852 ~ 5655578 (-)
AMCG00014226 NA coding upstream 1113272 5679216 ~ 5698927 (-)
AMCG00014231 NA coding upstream 1260815 5826759 ~ 5843215 (-)
G68406 NA non-coding downstream 143229 4416656 ~ 4416934 (-)
G68386 NA non-coding downstream 260479 4298305 ~ 4299684 (-)
G68336 NA non-coding downstream 430422 4105518 ~ 4129741 (-)
G68325 NA non-coding downstream 460236 4099564 ~ 4099927 (-)
G68324 prps2,LOC108413289 non-coding downstream 461688 4096215 ~ 4098475 (-)
G68474 NA non-coding upstream 81758 4647702 ~ 4648211 (-)
G68514 NA non-coding upstream 319981 4885925 ~ 4886283 (-)
G68535 NA non-coding upstream 768148 5334092 ~ 5334383 (-)
G68537 NA non-coding upstream 831884 5397828 ~ 5398235 (-)
G68547 NA non-coding upstream 1021555 5587499 ~ 5587992 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other downstream 1165409 3385757 ~ 3394754 (-)
G68088 NA other downstream 1731019 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 1906916 2641059 ~ 2653247 (-)
AMCG00014134 NA other downstream 2017466 2531954 ~ 2542697 (-)
AMCG00014119 NA other downstream 2435210 2085941 ~ 2124953 (-)
AMCG00014228 NA other upstream 1093128 5659072 ~ 5678499 (-)
AMCG00014241 NA other upstream 1493545 6059489 ~ 6108358 (-)
AMCG00014271 NA other upstream 2812144 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 2836208 7402152 ~ 7411890 (-)
AMCG00014278 NA other upstream 2847785 7413729 ~ 7423291 (-)

Expression


Co-expression Network