AMCG00014214


Basic Information

Item Value
gene id AMCG00014214
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 4837723 ~ 4851433 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014214
GTTAAAGCCACGCCGTCGGATTAACTAGTGACAGCAATGCAGATTATTTCACTTGAATTAAACGCCATGAATTTTGCATCCGACCCACCACGCAGGGCAGTGTGGGACTTGTGATTTTGAACGGGGTGGCAATAGGGTGGTTGTGTCGCTGTGCATTTAATGCACATCTGCAAGTAAACCCCAcgtccctctcctctccctctccctctctctcttctctctctgacAGGAAGATGAAGACCACGCTACTGCTGTGCATGTGTCACATTTGTGGTGTAGCTACACTTGCTAAGCAACCCAACTTCGTGCTCATGATGGTGGATGATTTAGGAATGGGGGATTTGGGATGTTATGGAAACACAACTTTAAGGACCCCTAACGTCGACCGTCTCGCCCAGCAGGGTGTGAAGCTGACGCAGCACATTGCCGCGGCCCCCCTGTGCACCCCAAGCAGGGCGGCCTTCCTGACGGGACGATACCCAGTTAGATCAGGCATGGCAAGCTATGGCAAAGTAGGGGTTTACATATTTGCTGCTGCTTCCGGTGGTCTCCCTGCACAGGAGGTAACATTTACTAAGCTTGCAAAACAAAAGGGCTATTCGACAGCACTTATAGGGAAATGGCACTTGGGTTTAAACTGTGAGAGGAGCGATGATTTTTGCCATCACCCAAGCAGCCACGGCTTTGATTACTTCTATGGCATCACCATGACCAATCTGAGAGACTGCCAGCCAGGCCATGGCACGGTCTTCTCCAATGTGGTGGCGCACGTTCCCTTCCAGGGCATCGGACTGGCTGCTCTCACCGTACTGGTCTTGCATGTGTTGGGCATTTTTACTCTGTCCTGGAGAATATTGTCGATATTCTCACTGCTCGTTGCCCTGTCTCTGCTCCTCTTCGCTGGGTTCGTTTTCACGTTCCCTTATCTCAACTGCCTCCTCATGAGAAACCATACCATCGTCGAGCAGCCATTTTCCGCCGAGAGCTTGACCCAGAGGATGACGCACGAAGCGGTGGACTTCCTGAGGAGGAACACTGAACGGCCATTCATCCTCTTCTTCTCATTTGTCCAAGTCCACACTGCGCTCTTTGCATCCGAGAGGTTCAGAGGGAAGAGCGCGCATGGCGTGTACGGAGACGCTGTGGAGGAGGTGGACTGGAGCGTCGGACAGATTGTGAACACGTTGGACAGCCTCAACCTGACTGAGAACACTCTGGTGTATCTGACCTCAGACCAGGGCGCCCATCTGGAAGAGATCTCCATCCGAGGGGACGTTCACGGAGGATGGAATGGCATATACaaagCTGGGAAATCAACTAACTGGGAAGGAGGAATTCGTGTTCCCGGGATTGTGAAGTGGACTGGAGTGTTGCCTGCTGGCATACAGGTGGATGAGCCCACCAGCAACATGGACATCTTCCCTACCGTGGTCAGCCTGGCAGGATTGCAGATGCCCAGAGACAGTGTAATAGACGGACACGACTTGATGCCCTTGCTGCAGGGCCGGGTGACACGGTCGAATCACGAGTTCCTCTTCCACTACTGCAACGCGTATTTAAACGCAGTTCGGTGGCACCCAAGACAGAGTGATTCTGTCTGGAAAGCCTTTTTCTTCACTCCCGATTTCTACCCCGAAAATTCAACCCTttgtctgcacacacacacgtgtttcTGCACAGAGGAATACGTGACGTTCCACGACCCCCCGTTGCTCTTCGACCTTTCCAAGGACCCGACCGAGAGCAATCCTCTCACGCCAGAAACGGAGTCCAACTTCCAGCCGGTCCTGGATGCCATTCGCGAGGCCGTGGCCCTTCACACCAGCACCCTGACCGTGGCCCCCGACCAGTTCTCTTTCAGTAACTCTGTGTGGAAGCCGTGGCTGCAGCCCTGCTGCTCCTCGCTGTCCgagttgtgtgtgtgcgatGAAGACCGGTCCACAGCTAACCAATAAAGACGTGCAGTTTTCTCATCCAGACTGGGCTGAGACGGGAAAGGTGTCGAATGAACGCTTTTTTGCTGTGTCAAAGGAACGCTTTTTTGCTGTGTCGAATGAACACTTCACAGCTACTTCTCTGCTGTGTCGAATGAACAACTTCTCTGCTAATTCTCAGGTGTGTCGAATGAACACTTCTCTGCTGTGTCAAATGAACACTTCTCAGGTGTGTCAAATTAACCTAGTTGgcttgttttggaaatgtatagATGGCTTTTGGAGAGTTGTTTCTATCGCAcatgtgtaataaatacatttggaagaagGTGAGTTTTGTTAAACTCAGTAGTATATTAATAGCAATTTGGTAGTACTGACTATActaagtataatttaaaagtattcaatcttgaaatagtttaatgaaaatgCTGTTTGCTTCCttatattgaaatgcaaagaaataaacTCGATGTGATGATATAAACCGCAGTCTGATCCATATGAAATGGGACTGTGGCATTGAGTAAAAATTGAATTTATTCACCTAAAGATATTAGTATAACAATCCATTTTGTGCGTGATTGAGGCAGTTATGAAAGTTTATATTGCCTGCATGccaattatttctgtatattttgtattaaaaaaaggctgttaaaaaataacaa

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008484 sulfuric ester hydrolase activity molecular_function

KEGG:

id description
K01131 STS; steryl-sulfatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014214 True 2608 mRNA 0.49 9 4837723 4851433

Neighbor

gene id symbol gene type direction distance location
AMCG00014213 anos1,LOC104963477 coding upstream 91721 4723654 ~ 4746002 (+)
AMCG00014208 NA coding upstream 254514 4568669 ~ 4583209 (+)
AMCG00014209 NA coding upstream 289316 4520802 ~ 4548407 (+)
AMCG00014207 LOC108443135,LOC102799111 coding upstream 338767 4460775 ~ 4498956 (+)
AMCG00014202 NA coding upstream 521044 4298341 ~ 4316679 (+)
AMCG00014216 hdd1a coding downstream 99897 4951330 ~ 4958249 (+)
AMCG00014217 NA coding downstream 210399 5061832 ~ 5062272 (+)
AMCG00014218 NA coding downstream 228076 5079509 ~ 5079783 (+)
AMCG00014220 nlgn4,nlgn4x coding downstream 263217 5114650 ~ 5118152 (+)
AMCG00014219 NA coding downstream 277738 5129171 ~ 5130645 (+)
G68497 NA non-coding upstream 52122 4785326 ~ 4785601 (+)
G68473 NA non-coding upstream 189510 4647710 ~ 4648213 (+)
G68434 NA non-coding upstream 249295 4584474 ~ 4588428 (+)
G68422 NA non-coding upstream 287721 4500864 ~ 4550002 (+)
G68376 trappc2 non-coding upstream 541904 4294817 ~ 4295819 (+)
G68509 NA non-coding downstream 5596 4857029 ~ 4857230 (+)
G68538 NA non-coding downstream 599855 5451288 ~ 5451521 (+)
G68559 NA non-coding downstream 805817 5657250 ~ 5704009 (+)
G68589 NA non-coding downstream 927945 5779378 ~ 5782386 (+)
G68623 NA non-coding downstream 1045637 5897070 ~ 5956185 (+)
G68475 NA other upstream 185759 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 706005 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 2127394 2706840 ~ 2710329 (+)
G67896 NA other upstream 2707578 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 2935036 1900220 ~ 1902687 (+)
G68830 NA other downstream 2494762 7346195 ~ 7349467 (+)
G68848 NA other downstream 2562207 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 2613070 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 5151625 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 5296546 10147979 ~ 10151913 (+)

Expression


Co-expression Network