Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014219 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 5129171 ~ 5130645 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0035235 | ionotropic glutamate receptor signaling pathway | biological_process |
| GO:0007215 | glutamate receptor signaling pathway | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014219 | True | 843 | mRNA | 0.58 | 2 | 5129171 | 5130645 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014220 | nlgn4,nlgn4x | coding | upstream | 11019 | 5114650 ~ 5118152 (+) |
| AMCG00014218 | NA | coding | upstream | 49388 | 5079509 ~ 5079783 (+) |
| AMCG00014217 | NA | coding | upstream | 66899 | 5061832 ~ 5062272 (+) |
| AMCG00014216 | hdd1a | coding | upstream | 170922 | 4951330 ~ 4958249 (+) |
| AMCG00014214 | NA | coding | upstream | 277738 | 4837723 ~ 4851433 (+) |
| AMCG00014221 | prkx | coding | downstream | 377379 | 5508024 ~ 5550098 (+) |
| AMCG00014222 | NA | coding | downstream | 464810 | 5595455 ~ 5607754 (+) |
| AMCG00014223 | NA | coding | downstream | 477128 | 5607773 ~ 5643489 (+) |
| AMCG00014225 | NA | coding | downstream | 591252 | 5721897 ~ 5739921 (+) |
| AMCG00014224 | NA | coding | downstream | 624884 | 5755529 ~ 5774761 (+) |
| G68509 | NA | non-coding | upstream | 271941 | 4857029 ~ 4857230 (+) |
| G68497 | NA | non-coding | upstream | 343570 | 4785326 ~ 4785601 (+) |
| G68473 | NA | non-coding | upstream | 480958 | 4647710 ~ 4648213 (+) |
| G68434 | NA | non-coding | upstream | 540743 | 4584474 ~ 4588428 (+) |
| G68422 | NA | non-coding | upstream | 579169 | 4500864 ~ 4550002 (+) |
| G68538 | NA | non-coding | downstream | 320643 | 5451288 ~ 5451521 (+) |
| G68559 | NA | non-coding | downstream | 526605 | 5657250 ~ 5704009 (+) |
| G68589 | NA | non-coding | downstream | 648733 | 5779378 ~ 5782386 (+) |
| G68623 | NA | non-coding | downstream | 766425 | 5897070 ~ 5956185 (+) |
| G68635 | NA | non-coding | downstream | 882037 | 6012682 ~ 6013059 (+) |
| G68475 | NA | other | upstream | 477207 | 4649200 ~ 4651964 (+) |
| AMCG00014196 | NA | other | upstream | 997453 | 4127476 ~ 4131718 (+) |
| AMCG00014146 | NA | other | upstream | 2418842 | 2706840 ~ 2710329 (+) |
| G67896 | NA | other | upstream | 2999026 | 2126872 ~ 2130145 (+) |
| AMCG00014111 | NA | other | upstream | 3226484 | 1900220 ~ 1902687 (+) |
| G68830 | NA | other | downstream | 2215550 | 7346195 ~ 7349467 (+) |
| G68848 | NA | other | downstream | 2282995 | 7413640 ~ 7416594 (+) |
| AMCG00014272 | tbc1d23 | other | downstream | 2333858 | 7464503 ~ 7482560 (+) |
| G69406 | tgfbrap1,LOC102780916 | other | downstream | 4872413 | 10003058 ~ 10008648 (+) |
| AMCG00014345 | NA | other | downstream | 5017334 | 10147979 ~ 10151913 (+) |
