AMCG00014221 (prkx)


Basic Information

Item Value
gene id AMCG00014221
gene name prkx
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 5508024 ~ 5550098 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014221
ATGGCAGCGGCCAAAGCCAAGGCTGGTCCCGGGGTGAACAGCGACTGTGGCTCCTGCAGGGACGGTGGCCACGGCGCCGGCGCTGCCAGTCCTGGCGCCGCACAGAGCGGCGCGGCAGCCCCGGCGCACAGGACCTACACGCTGGAGCAGCTGGACACGGTGGCCACTGTGGCCCCGGCTTGGGTCGTTATACGTGCCCTGGCGTTCCCTCTGCAGGTGCGGCGCCTAATTACTGTAACTGCCAAGCGCTTGTTAACGCTGCCGCTTCTGCTCGTACTGTTTAGTAGTgtgttcagtttttctttctcctctttgCCTGCAGGAACCGGGACGTTTGGCCGCGTCTTTCTGGTGAAGGACAAGACCACGAGAGGCTTCTTCGCTCTGAAGGCGATGAAGATCCCTGACGTGATCCGACTGAAGCAGGAGCAGCACGTCCACAACGAGAAGGCTGTGCTGGCGGAGGTCAACCACCCCTTTCTCATCAGGCTATTCTGGACTCATCACGATGACCGTTTCCTCTACATGCTGATGGACTACGTGCCCGGAGGGGAACTGTTCAGCTACCTGCGCAATATGGGCCGCTTCAACAACAGCACGGGACTGTTTTACTCTGCGGAGATTGTGTGTGCCATCGAGTACCTGCACTCCAAAGAGATCGTTTACAGAGACTTGAAACCGGAAAATATTTTACTGGACAGAGAGGGCCACATGAAGCTCACGGACTTTGGGTTCGCCAAGAAACTGGTAGACAGGACCTGGACGCTGTGCGGGACTCCCGAGTACTTGGCACCGGAAGTGATCCAGAGTAAAGGCCACGGCCGGGCGGTGGACTGGTGGGCCTTGGGGGTCCTGATCTTCGAGATGTTATCTGGGTACCCACCGTTTTTTGATGACAATCCATTTGGCATTTACCAGAAGATACTTGCTGGCAAACTGGACTTCCCCCGGCATCTGGATTTCTATGTAAAagacCTCATTAAGAAGTTCCTTGTTATTGACCGAACAAGAAGGCTGGGAAACATGAagaACGGAGCAGATGATGTGAAGAAACACAGATGGTTTAAGTCTATAGACTGGGATGCCGTTCCTCAGCGAAAACTGAAGCCACCGATCGTACCCAAGGTATCTCATGACGGCGATACGTCAAACTTTGAAGCATATCCAGAGGACGAGTGGAAGAAGGAGCCCCCCGTCCCGCCTAAGGATCTAGAGATATTCAAGAACTTCTGATCAGCACTGTGAGACGCGCACCTTCAGATGAAGACTTCCTGGCCGGAGGAAACGGCTCCAGCAGAAGCACGGTGTCCTTCGGCCCCCTCAACCCCCGAGCCTCTTAATATATGCAACAATCCAAGGTCCTCCTGATACCAAAACACCgcgttcatttttattttgccattgtCGTTTATGTGACGAAGAGGAAAATGGTTACACTAAGaacaattgtaaaaatgtacaaaccatcgttttgttttttataacttTTGTTTCGGTGTGGAAAGTTTTTATTTCACGTAAAATAGGAAATTCATGACGTTTTACCTCTAGGTTTGTAAGCgagttgtacattttaatgtctgCAGGTTTgctgaatgtgtatatattgcagGGGAGAGGTACCAAGCACAAGAGTGGCTGAGTCTCATGTATTCTTTGGTTTCTGAAGCGATGAGCCTTCGCTTCGGTTTGGAGCAGAGACTTTATCTGTGACACGCATATCAAACTCTGACATCACTGTAGAAATCCTTCGCTGGCCACTAGGGTTCACTCGTCGATAACGATCTGAATAATCCTGCGAATCCCGTGCGTCCGCccttatttatttcaggtttcTTGAAAAGAGGGATTCTGTCTTTATTTAACCATTCTGAAAGCGTGTAACgtacaaaaaaaagcactgctTGCGTTAAACACTTCCAATACGACCCTGGTCTTATTTGTTGGCACAAGACGTAAGGGTGAACGCTGTTTTGCTGAATTGGAGCACTTGCTGTGAAATGTGGCCTTACTTTCTCTCTCTAAGGAATATTATTAACAATGGCTGAAGTCAGAGAAAGCAGTGGTTTGGAAATTAAACTTCAGGGGAGGGTGACTTTTGCAGCCCCACTCTGAGCGTATTTGTGACTTCTGACCTCGACACGCCTGTGTTGCACGTGGGAAGAAACGGTCTCTCTAAACCGAGTGGGGCTCGTAACCCAGACTTTCATTATCGATACGACTTTGAAGCTAAAATTGTCGGCAAGATTCACCTCTTAAAACGGTCTGCTCAGATGCCTGCTTGTTCACCGTCTGTCCATTCTCAGATGCACCAGTTCCCTGTGTTGACAACGTAGTGCGTTTGTAATGGAGCGAAGCAGGAAGTGGtcagcctgtgtgtgtctctaggTTTTGTGTAATTAAGCTGTTGTGGACCAATTATCAGTGCTGGAGTCCAGAAAACAACAGGTGTTCTTGATTTATAAAGTGTCTGACACGACGAACACCACATCCACATCTGCAAAGCTTTAAAAGTGTCGCAGTGGTCTCACAGAAGAGGCGCTGTGTATGTGGCGGTGAAGGACGGTCCTTCGGCTGTTTAATAGCGACACGCCAcatattcttttattatttattttatttttcattttatctgtgtgtgtttgtgtgacataATGAGCATTAAAGAATTGACCAGAGTGCCCTGGATTCCCCCCCATTTTAAGCAATTTTCCAATCTCCAAAAGGTtaaggtattttatttgtatgttttttgttttgtgtgtttttttttctagcaaaaaacaaataatggtaTTTTTGTACCATTCGAGCTGGAGACaatgtttggttgtttgttttctcaccCTTAACCAATGCCTTATGTTTGTGTTCTGAATTAATCTTTTATTGAACTGCCATTCTTTCCAAACTGTGTGTATCTCAAAGTGTGGCTTGAATCAGTGTTACCTACTTAGACTACTTGTAAGAATCATCTTCTCCTAGTCCTGTAAAATCATAGGTCTTTCTCCCATAGAAATGTCACTTCTTCCAAAACACACTGAAGAATAAAATCTCCTTTCAGAGTGAATTATTTTGCCTTAACCTCAGCTGTCATGTTCAGTTACTATGTTCACCACAATGATCTCAGATTTGTATCGGTCTGTCCTCGCAAGGTGGTGATTTTGCTCTGTGTACTTCAGATAGTTCAGACCATCCCGAATGTAATCCATGGCTACGCTTAACGACTGGATGCATGCTTTGAAAAgtgctgttaaaaaaaagttagttttGTGCTACTGACACTTCGAGATCAATGACCATAACTACTGGTGTAACTGGAACGCGAATGTAGTTGCACTTAAATGCAGTTTCCAGGTGATTTTAAGAAGTGGACGAGCGATTGAGGACTGTTAGTATGAAAGAATTGGTGCAGAACTGACTTGAAATCCAGTTTACAGGGGAACAGAGTTTAAAACCAACGCAAATCTACAAATATATTCCGTAAATGCCTGCCTTGAAGCACCCACACGTCGTTCACTGTGTCAACTCCTGTTTGGATCTACAATATTAGTGTTAAAGTCGCTACGATAGGATTTGCAATCAAATGCACCAGCCGTTACTACTGGGAACTCTGGTGACCTTGCTTTCTTCACTCACACCTGCATCACGAACTATCGCAGAGCAATCTGTATGCTTTCAGACCTGCGATACTCCGCAATTTCATCTGCACCCCGGGACTAGTGTGTGATTAAACACTACTGACAGTAACGGCAAGGAAACCATCCTGGGATGGTACTTGAGTCCATGGACGGGGCGGTCTTGGAAGAAGATCATTTGTATACTGCACATTTGTTtagttgtgtgtgagtgttaacTCTAAGGGACGCAATATGGGACTCCCTGATGTCTAAAAGCCTTCAGTAAATACTTTCCTTTTTGGTTAATAATACGGTTTgttcaaatcattaaaaaatgttctaaACATTGAATGTGGATGTTTtctttagtgtgtgtttgtgtgtgtattccaTAGAGCCAGTCTACTCTGTAAACCCacagtgtgatttaaaataaaatactgtgtgtgaaccagaaaacaatatata

Function

symbol description
prkx Predicted to enable cAMP-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation and signal transduction. Predicted to act upstream of or within protein phosphorylation. Predicted to be part of cAMP-dependent protein kinase complex. Orthologous to human PRKX (protein kinase X-linked).

NR:

description
PREDICTED: cAMP-dependent protein kinase catalytic subunit PRKX

GO: NA

KEGG:

id description
K19584 PRKX; protein kinase X

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014221 True 4088 mRNA 0.45 10 5508024 5550098

Neighbor

gene id symbol gene type direction distance location
AMCG00014219 NA coding upstream 377379 5129171 ~ 5130645 (+)
AMCG00014220 nlgn4,nlgn4x coding upstream 389872 5114650 ~ 5118152 (+)
AMCG00014218 NA coding upstream 428241 5079509 ~ 5079783 (+)
AMCG00014217 NA coding upstream 445752 5061832 ~ 5062272 (+)
AMCG00014216 hdd1a coding upstream 549775 4951330 ~ 4958249 (+)
AMCG00014222 NA coding downstream 45357 5595455 ~ 5607754 (+)
AMCG00014223 NA coding downstream 57675 5607773 ~ 5643489 (+)
AMCG00014225 NA coding downstream 171799 5721897 ~ 5739921 (+)
AMCG00014224 NA coding downstream 205431 5755529 ~ 5774761 (+)
AMCG00014229 sept10,LOC105911973,LOC107697805,LOC108430022,LOC103039444 coding downstream 316807 5866905 ~ 5879257 (+)
G68538 NA non-coding upstream 56503 5451288 ~ 5451521 (+)
G68509 NA non-coding upstream 650794 4857029 ~ 4857230 (+)
G68497 NA non-coding upstream 722423 4785326 ~ 4785601 (+)
G68473 NA non-coding upstream 859811 4647710 ~ 4648213 (+)
G68434 NA non-coding upstream 919596 4584474 ~ 4588428 (+)
G68559 NA non-coding downstream 107152 5657250 ~ 5704009 (+)
G68589 NA non-coding downstream 229280 5779378 ~ 5782386 (+)
G68623 NA non-coding downstream 346972 5897070 ~ 5956185 (+)
G68635 NA non-coding downstream 462584 6012682 ~ 6013059 (+)
G68637 NA non-coding downstream 504437 6054535 ~ 6056347 (+)
G68475 NA other upstream 856060 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 1376306 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 2797695 2706840 ~ 2710329 (+)
G67896 NA other upstream 3377879 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 3605337 1900220 ~ 1902687 (+)
G68830 NA other downstream 1796097 7346195 ~ 7349467 (+)
G68848 NA other downstream 1863542 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 1914405 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 4452960 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 4597881 10147979 ~ 10151913 (+)

Expression


Co-expression Network