AMCG00014222


Basic Information

Item Value
gene id AMCG00014222
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 5595455 ~ 5607754 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014222
ATGGCCCGTCTTGGCGCTCTGTCCTTGGTGCTGATCGTGGCCATAGCGCTGCCACACGGGGGTCTCTCCTGCCCCCATCCCTGCGCCTGctacctgcccaccgaagtccaCTGCACTTTCAGATCCCTCATCTCCATCCCCGCCAGGATGCCGAAGCACGTGGAACGAATCAATTTAGGGTTTAACACTATTAACAAAATCACAGAAAGCTCTTTTGCTGGACTGAGAAAACTGGAGCTCCTGATGATGCATGGGAATGACATCCACGGCATCCCCAACGGGGCCTTTAGAGACCTCATGTCACTGCAGGTGCTGAAAATGAGCTACAACAAGTTGAAGGTTATCAGCGGACATACCTTTCAAGGCCTCTCGAGTCTGATAAGACTGCATCTCGATCACAACAAGATCGAGTACATTCAACCCGACGCTTTCCACGGGTTGACCTCGCTGCGCCTGGTCCATCTGGAGGGGAACgtcctgcagcagctgcacCCCGATACCTTCGCAACGTTCTCCGTcttgcagcattttaaaatctccACGGTCAAGCACCTCTACCTGTCTGAAAACAGCCTGACTACTTTACCGAGCAAGATGTTCAAAACAATGCCGCAGCTGGAGAACGTCTACCTGCACGGGAACCCGTGGACTTGCGACTGTGGGATGAAGTGGTTCTTGGAGTGGAATACGAATTCTGAAGGtgtcttaaaatgtaaaagggaCAAAGCATATGAGGGAGGCCAGCTGTGTCCAAAGTGCTCCACCCCAAAACAGCTGAATAACAAGGACATCCTCTTGCTGGATGATCTCTCGTGTCGCAGCCCCGTGATCAGTTTACCACGTAGGGAAAACGATGACACAAAGCGGGAGGACAGTGAGAGTGAAGTGCTTCCTCGGGAGCAATTCCAAGAGCCCTTCGGAGAAATGGCACTGAATTTGACAGATGAACACGGAAACAAAGTCAATCTGCAGTGTCACATCAGTGAGCCAGGAGACTCTACCAAGATACATTGGGATCATATTAATTCACAACAGATCTCTGTGAACATGACGCTGACACTCGACGTTGAATGCCCAATTGACCGCTTAAATTACGAGAGATTATGGAAGCTAATTGCATATTACAGTGAAGTGCCCGTTCATCTCGAGAGGGAGCTGATGCTGAGCAAAGAACCCAAGTTAAGTTTCCGGTACAGGCAGGACATTCAAAAAGATGCATATTATTATACAGGTgtgaaagcaaacattttatcAGAGCCATCCTGGTTAATGCAGTCATTTGTCAACATACAGCTGAACAGGCGACAGTCCTCTGCCAAGAATGTGAGGCTAATTCTCACCACTCGTGTTTCCCAAACGCTGGAAACGGAAGTTTCAAGGAGGCAAAAAAATAAGTGGGTCATGATAGAATCGAAAAACGACACCAGAACTGCGGTCAGTGCCATTGTAGGTAATTTGTGTCAACTGGACTGTACCATTTTGAGTTCTGGCGATCCTTCGATACAGTGGATGTTACCAGACGGGACTAAAGTGGAAGCACCTCATTTCAGCACAGACAACAGGCTTTCGGTTTCTAGCAATGGAAAGCTTACCATCAGATCAGTAGACCATTCTGACTCTGGCATCTACTACTGCATTGCACAGGTCAAGGCGGACCTGGATGTGTTGGCTTTCCGCCTATCTGTGGAAGAACATCCAGGCCCATCGTTAGGAGACGGAGGGGGTTCGGTGACTAAGTTTGTTGGTGAACCTATCTCTCTGCCCTGTGTTGCTTCAGGCATTCCAAATGCTCAACTCAGCTGGATTCTTCCCAgtaacaacattttacattttaaatcaaactcaTCCAGGGCTTATGTCTTTGGGAATGGTACTCTATTCATACCCCAGACCCAGATGACAGATACCGGATACTACAAATGTGTGGCTCTAAACCAACATGGTGTAGATTCGGTGGCAACTAAGGTAACTCTGAcgagaaagaaaatgacacaaTCATTTAGAAAGTTTCCCATGAGGCCCCAACCTGCCGCAGGTGGTCCCACCAAAATTAAAGTCTTCGTGAAAGATGACGAGGAGTCTTCTGGAGACGACAGTCTTCCAAAGCCCTCGGAAAGAGGATTGTCCAGCGGCATGGACTCACAATCTGTAAGGAGAGGTCCAAAAATGAACACACGTGGACCCCAACTCCGAAATTCAAGAAGAAGGTTAAAGGTGAAGAATGGATTAGGACGGCCAAAACAACCACAGGTAGAAGGCCAACGCACCTTTGagacacaaaggaaaataaacgtgtcaaaaaaaacaattgaccCACAACAATGGGCTGACATTTTGGCCAAGGTTCGTGAAAGAACCGTTTTGAGAACAACGCTGCCACCCACCGTATACAATAGCGCACCAGTAACTACACCATCTGAGAATGTTGTGAAGTTACAATCTTCAGATGTTACAGAGGGATCTTCTATAGATGACTCAAACCTCCAAGAGGAAGGCCTTTTTCCACTCACCACACCACAAAATCACATTAAACATGATGAGAATGACCTGGTTACAGAACCCACTCATACAGAAGATCAAACTAATACCTTTTACCAAATCTCTGCCCCTAAAACTAACATTGACTCATATGTTGTGACTTCCCGTACTCATATTTTACAGTCAACATCTGGGCCACAGAATACAAACTATGTTATTACAAAttctaaagaaaatgaacatgaGGCAAATACTTTAAGGACTAGTACACTGTATGAAATTGATGTACAAGGAAGCAGTGCTGTGGAAATAAATTCTCCTTACACCATGTCAGATGTCCCAATCAGATCCTCGAGAATAGAAAAGCCCAAAAGCAATGATCATACCAGTACCCCAACAAGCCCAAGTGAAGAGGTGATtgattacatattaaaattaacaCCATCTGTGCCCGCTGATACAAATAGTGTAGACTCTGAACAAATCACAGACAATGTAAATGTTGATGACCTTTccaaacttacaaaatacacagtTGAGGCAGCTGAACAAGATCAAATTAATGAACGAACTCAGGACAGCTCAGATCATCCACTATTAACAGCCAACATTCCACTTTCCACTACTGTAAGGACAACAGTGGCCAGTACAAGTGCTAGAACTCATCCACCCTCTACACATTCTAGACACCCATTATATTCCAGGAGGCGATTTGGTGGTAGAAGGAGACCCAATAGACTAAGACCAAGACCAAATTATACTGGTTTGTTTCCACGTATTCCCTCGGCAAATCCACAGCTTACAGTAGCATCTCCAACCAAAAGAGTGCCTTCGCTAGTGATCAACTTTCCAACACCATCTCCCAAATCACAGACACCAACAGTGGCGGAGACtacattgttaaataacaacaaaggGGGACCCACTATCGCAGCTCCACCTACAGTTAATTACTCTTCTAAAGACACATTGAATCAGATGGAAAATAGCGTTCCCGGGCAACGTGAGAACTCTAATTCAATGTCTATCAAACCCACTGTTGATCCCATAAATCAGGCTGCTCTTAAGAGGACCACCCCAGCCTCATACACTTTTATTAATACCGTATTACTAGCTACTGTGGTTCCAAAAAGTGCAACTTCATCTCCTTTCGAAGAGGgacatgaacaaataaatgaaccCAAAGTTCCTACTGAAGCATTTCCTACATCACTGCCAGGCCATGAAACTGCTTCATTGGCAACCCGTCAAAGGGAGTTTACAAGCCTCGGTCTTCCAACAGTAAAGATGTCTGGTGTTAGCCTCGATGAAAATGCTGCTGGAGTCATCAGTACTACACAAGGCTCTGGCAGGGTCTCACCTGCTTCTCACGTACAGTCGGGATTACAACCAGAAACTGGTTTCAACAAATTGGGCAATAAAAATCAACCCACGTCTTCAAGAGAAACGTCAGCCAAGGACAAAGGTGTAGAGAAACCGTTACCAATAAAGCCTCCACCCACCCCTTTGCCGAGCAGAACAACACAAAGCCAACACAAAGTCAAAATAGTACAAGATGCTCAAATCCCAAAGGTGAATGCAAAGCCAAACACGTATGTGGTGACAGACAAAAAGAAGGAAACATCATTGAATCATCAAATACCAGCGAGGAAACCTCATATATCAGGTAGTTtcaatcacagatctgttttgattaaaaacacagctgtcacAAGAAGACCTCCTGCTGTGTTCACCAGGGCCTGGGAGCAACAACTTTATATTTCCAGCAAACCAGAACCAGCAGAAACTGCAGAAAAAGCTCCATTGCCAAGGAAAAATGAAGTCGGTAGCAACAACAataccaccaacaacaacaaaaccaacaacaaaaccaacaaccacaaaaccaacaaccacaacaaaaccaacaaccacaacaacaaaaccaacaaaaccaacaacaccaacaacgacgacaacaacgacaacaacaaaaccaacaacaatgacaacaacaacaaaaccaacaatgacaacaacaaaaccaacaacaccaacaacgatgacaacaacgacaacaacaaaaccaccaacaacaattacatcaacaaaaccaacaacaacgacaacaaaaccaacaacaacaacgacaacaacaaaaccaacaatgagaacaacaaaaccaacaacaacaatgacaagaacaaaaccaacaacaatgacaacaacaacaaaaccgacaacaacaaaaccaacaacaacaacggcaACAACGACAAAACCAataacaacgacaacaacaacaaaaccaaccactataacaacaacaaaaccaccgacaacaacaacaaaaccaacaacgACGACAACGACAACAGCAACAGCTCCAAGACTGGACCTGCACACGGTTCTAGAAACTTTGGTTCAAATTACATTCCTGAAAGACCAGGACAAGGTGGACGAACGCCCACTATAAACCAGAGGTACCCATATTACCACAACAGCAGGAATCCTGTAATCCTGCACAGGCCAGGTCTCTTCCAGACACCTATGAGGACCAAACCACCCATCACGCCTGGAAGACCTCCCAGTGAATCAACGTCAGGTTCAGTCACCACTGCAAAACCCACTGCGCCTAAATCTACATCCGTAAACATAACCACAGCTGGGACAACACCAAGAAAGACAACCACCAGTCCTATGACGACCAGCTTAACAGCACTATCTACATCTCCGTTGACAGTCACAACTCAGATCCATCAGAATGAGGTTAATAAACAGAGACTCCCGTATTCTCCTTTCATCCCAAGAGTTCCAAGTAACACTCAGAATGTGTCCAGTGTTCCTCAGAGGCCCCCCAACGTACAGATCCACCGAGCGAGACCTAAAATCACTACAACTAATCTCCATTCAGTATCTGTGCAAGCTGAAATGGACGCTGTACTGCCCTGTGATTCAATAGGGGAACCTAAACCTTTCTTGACTTGGACCAAAGTTTCCACTGGAGCTGTGATGGCCCTGAATACGAGGCTCCAGAGGTTCGAGGTCCAGAAGAACGGGACTTTTGTTATCCGCAACGCCCAGCTTCAGGACCGGGGTCAGTACCTTTGCACCGCCCAAAACCAGTACGGCGTGGATAAAATGATGGTTACGCTGATTGTGCTTGCTCAGCAGCCGAGGATGATGCAACCCCGATACCAGGATATTACAGTTTACCTCGGAGACAGTGCCAACCTAGAGTGCAAGGCCCAGGGACTGCCAAACCCCCACATTTCATGGATGCTTCCAGACCATACGATGTTGCGTGCCGCCACCAGCACAGAGGGGCGGGTGATGTTATTGGGCAACGGGACTCTGAGAATTAAATTCACAAACTACCCAGACAGAgggatttataaatgtattgctaGCAATGCGGCAGGCGCGGACACCTTGTCTGTGAGGCTGCACATCGCCGCCCTGCCCCCCATGATCCAGCAGCCGCGGAATGAGAACTTCACCATCGCCGAGGGACAGGCAGTGTACGTCCACTGCACGGCCAAGGCGGCCCCCCAGCCGAGCATCCGCTGGCTTATCTTCGATGGCACGCAGATCCGGCCCTCACAGTTCGTGAATGGGAAACTGTTCGTGTTTCCCAATGGCACACTTTACATCCGCAACTTGTCACCAAGGGACAGCGGGAACTACGAGTGCATGGCCAGCAACACCGTGGGGGCGTCCCGGAGGAGCATCAGCTTGACCGTGAAGAAGAACGCCTCCACGGCCAAAATCACTTTGTCTTCTCCTCAGACAACGGATGTCTCCTATGGGGGTCAGTTGCGCCTGGACTGCTCGGCTTCTGGAGACCCAGGGCCAAGAATAATATGGAGAGTCCCATCCAAGAAGCTGGTGGATGCACAGTATAGCTTCGATCCCAGAATAATAGTCTACGGCAACGGCACCTTGGTCGTGCAGGCAGTCACGGAGAAGGATGAGGGAGACTACCTGTGTGTGGCCAGAAATAAGATGGGAGACGATTACGTGCTTCTAAAAGTAAGCGTGATGATGAAGCCGGCCAGGATCGAATACAAGCAGCAGGAGAACCACAAGGTGATGTACGGCGGAGACCTCAAAGTGGACTGCATAGCCTCGGGCCTCCCCAATCCCGAAATCAAATGGGCTTTGCCTGACGGTACGATGGTGAATAGCATCCTGCAGTCTGACGATAGCGGCGTCCGCACCAGGAGGTACGTGGTGTTCGACAACGGCACGCTTTTCTTCAATGAGGTCGGGATGAGAGAGGAAGGGGACTACACCTGCTATGCAGAGAACCAAATCGGGAAGGACGAAATGAAAGTGCGTGTGAAGGTGGTGGCGCATGTCCCCATCATCAAAAACAAGACGTTCTCCACTGTGAAAGTGCCGTATGGGGATTCGGTGGTGCTGAGCTGTAACGCGAAGGGGGAACCGACGCCTACCATCACCTGGCTCTCTCCCACCAACCGTATCATCCCAGCCTCCTCGGATAAGTATCAGATACACAAGGACGGGACGCTGCTCATACAGAAAGTCCAAAGGTTCGACAATGGCAACTACACCTGCACGGCCTTGAACAGCGCGGGGCAGGACAGGAAGATGACCAGAGTGGAAGTCTTGGTCTCTCTGCCCACCATCAATGGCATGAGAAGTGTGGTCAACACCATCAAGGAGACGGCCGTCAAGGAACAGCGGAAACTCTTGGACTGCCGGGCTGAAGGGATGCCACTGCCACGAGTCATGTGGGTTCTGCCGGAGAACGTTGTCCTTCCAGCTCCCTACTACGGGAGTAGAATAACAGTCCACCGCAACGGCACGCTTGACATCCGGTCGCTGAGGAAAACGGACTCGGTGCTGCTGATCTGTATCGCACGCAATGAAGGTGGCGAAGCCAGGATGAATGTGCAACTTGATGTCACAGAGAGCATGGAGAAACCTGAGCTGAAGAGCCCCAAAGCTGAGATGGTGGCCCTAACTCCTGGTTCCACAATAAGTTTAAACTGTTCTGCCGAAGGCCGACCGACTCCTGAAATCATCTGGATCCTGCCAAACGGTTCCCATCTTTTTAGTGGCAGCTATTATTTGAGATTCTACCACAGGCAGAATGGTACGCTCCACATCAGCAACGCCTCGGTCTCTGACGTGGGCTCTTATCGCTGCCTGGCCAAGAACCCCGCTGGGCAAGCCGAGAGGACCGTCTCCCTCGTCCTCAGGAAAAAGCCTGACATCAACAACAAGTACAACTCTTTGGTGAGCATCATTAATGGGGAAAATTTACAGCTGCACTGCTTGTCAGGAGGAAACCCACAGCTGTTTTGGATGCTTCCCAGTGGGACAGTTCTCACTCGGCCGCAGAAAATGGGACGCTATGCGGTGTGGCAAAACGGCACACTCACGGTCCAACAGGCCTCTGTGTACGACCGAGGAATGTACTCCTGCAAGACCGTGAATGAATATGGAACCTCGGTGCTGACTGTACCGGTGATAGTCATAGCATACCCCCCCCGGATCACCAACGGTCCACCACCCGTGACGTACGCTCGACCTGGAGTCGCAATCCAGCTGAACTGCAATGCCATTGGCATTCCCAAGGCGGAGATACTGTGGGAAATGCCTGACAAAACACACTTAACTGCCTCCACTAATGCACGGCTGTTTGGGAACAAGTATCTCCATCCACAAGGCTCTTTGATCATCCAGAACCCGTCCAACAGAGACACTGGGTTTTACAAATGCACTGCAAAGAATGTGATAGGAAGCGATTCAAAAGCCACCTACGTtcatgtgttttga

Function

GO: NA

KEGG:

id description
K24400 MXRA5; matrix remodeling-associated protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014222 True 8268 mRNA 0.48 8 5595455 5607754

Neighbor

gene id symbol gene type direction distance location
AMCG00014221 prkx coding upstream 45357 5508024 ~ 5550098 (+)
AMCG00014219 NA coding upstream 464810 5129171 ~ 5130645 (+)
AMCG00014220 nlgn4,nlgn4x coding upstream 477303 5114650 ~ 5118152 (+)
AMCG00014218 NA coding upstream 515672 5079509 ~ 5079783 (+)
AMCG00014217 NA coding upstream 533183 5061832 ~ 5062272 (+)
AMCG00014223 NA coding downstream 19 5607773 ~ 5643489 (+)
AMCG00014225 NA coding downstream 114143 5721897 ~ 5739921 (+)
AMCG00014224 NA coding downstream 147775 5755529 ~ 5774761 (+)
AMCG00014229 sept10,LOC105911973,LOC107697805,LOC108430022,LOC103039444 coding downstream 259151 5866905 ~ 5879257 (+)
AMCG00014237 NA coding downstream 425683 6033437 ~ 6054435 (+)
G68538 NA non-coding upstream 143934 5451288 ~ 5451521 (+)
G68509 NA non-coding upstream 738225 4857029 ~ 4857230 (+)
G68497 NA non-coding upstream 809854 4785326 ~ 4785601 (+)
G68473 NA non-coding upstream 947242 4647710 ~ 4648213 (+)
G68434 NA non-coding upstream 1007027 4584474 ~ 4588428 (+)
G68559 NA non-coding downstream 49496 5657250 ~ 5704009 (+)
G68589 NA non-coding downstream 171624 5779378 ~ 5782386 (+)
G68623 NA non-coding downstream 289316 5897070 ~ 5956185 (+)
G68635 NA non-coding downstream 404928 6012682 ~ 6013059 (+)
G68637 NA non-coding downstream 446781 6054535 ~ 6056347 (+)
G68475 NA other upstream 943491 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 1463737 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 2885126 2706840 ~ 2710329 (+)
G67896 NA other upstream 3465310 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 3692768 1900220 ~ 1902687 (+)
G68830 NA other downstream 1738441 7346195 ~ 7349467 (+)
G68848 NA other downstream 1805886 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 1856749 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 4395304 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 4540225 10147979 ~ 10151913 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G236248 LOC104951987,LOC103359801 non-coding NC_053135.1 CM020932.1 20270484 ~ 20271413 (-)