AMCG00014224


Basic Information

Item Value
gene id AMCG00014224
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 5755529 ~ 5774761 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014224
TTTCTCATCTGTAAACTCCTGTGTTTGTCCACAGTGCAGTTCAGCTACCTTGACCTGACATCCCTGAGGTCCGTCCATCAGTTTGTGCAGAGGTTTAAAGACAGAGGCCTCCCACTTCATGTTCTTGTCAATAATGCTGGCGTCATGTTGGTTCCAGAGAGAAGGACAGAAGATGGCTTTGAGGAGCACATTGGATTGAACTACCTAGGGCACTTCCTGTTGACACAGCTCCTCCTGGACACCCTGAAGACGTCTGGGACCGAGGAAGCCTGCGCCCGAATCATCACCGTCTCTTCTGCGACGCACTACGTGGGAGAGATCACCCTGGAGGACCTACAGAGCAGTGCCTGCTATTCCCCCCACAGCGCCTACGCCCAGAGCAAGCTGGCCCTGGTCCTGTTCACCTATCACCTGCAGCGGCGCCTCGCGGCGGAGGGCAGCCCAGTAACGGCGAACACGGTGGACCCCGGGGTGGTGGACACAGACCTCTACCAGAACCTCAGCATTCCTGCTCAGCTGTGCAAGTGGCTGCTTGGCTGGCTGCTGTTCAAGAGCCCGGCGCAGGGGGCCTCCACGTCGGTCTACGCCGCGGCGGCGCCGGAGCTGGAGGGCGTGGGGGGCTGCTACCTGTACAATGGTCGAAGGACAAAATCTGCGGACACCTCGTACGATGAGGAGTTGCAGAGGCAGCTGTGGGTCCGGAGCTGCGGCCTGGTGGGGATCCGGGAGCCGAGCTGGAGGGCCGACTGA

Function

GO: NA

KEGG:

id description
K11170 DHRSX; dehydrogenase/reductase SDR family member X

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014224 True 750 mRNA 0.60 4 5755529 5774761

Neighbor

gene id symbol gene type direction distance location
AMCG00014225 NA coding upstream 15608 5721897 ~ 5739921 (+)
AMCG00014223 NA coding upstream 112040 5607773 ~ 5643489 (+)
AMCG00014222 NA coding upstream 147775 5595455 ~ 5607754 (+)
AMCG00014221 prkx coding upstream 205431 5508024 ~ 5550098 (+)
AMCG00014219 NA coding upstream 624884 5129171 ~ 5130645 (+)
AMCG00014229 sept10,LOC105911973,LOC107697805,LOC108430022,LOC103039444 coding downstream 92144 5866905 ~ 5879257 (+)
AMCG00014237 NA coding downstream 258676 6033437 ~ 6054435 (+)
AMCG00014243 NA coding downstream 460042 6234803 ~ 6239921 (+)
AMCG00014253 NA coding downstream 956863 6731624 ~ 6732517 (+)
AMCG00014259 NA coding downstream 1264993 7039754 ~ 7046875 (+)
G68559 NA non-coding upstream 51520 5657250 ~ 5704009 (+)
G68538 NA non-coding upstream 304008 5451288 ~ 5451521 (+)
G68509 NA non-coding upstream 898299 4857029 ~ 4857230 (+)
G68497 NA non-coding upstream 969928 4785326 ~ 4785601 (+)
G68473 NA non-coding upstream 1107316 4647710 ~ 4648213 (+)
G68589 NA non-coding downstream 4617 5779378 ~ 5782386 (+)
G68623 NA non-coding downstream 122309 5897070 ~ 5956185 (+)
G68635 NA non-coding downstream 237921 6012682 ~ 6013059 (+)
G68637 NA non-coding downstream 279774 6054535 ~ 6056347 (+)
G68649 NA non-coding downstream 298956 6073717 ~ 6110306 (+)
G68475 NA other upstream 1103565 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 1623811 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 3045200 2706840 ~ 2710329 (+)
G67896 NA other upstream 3625384 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 3852842 1900220 ~ 1902687 (+)
G68830 NA other downstream 1571434 7346195 ~ 7349467 (+)
G68848 NA other downstream 1638879 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 1689742 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 4228297 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 4373218 10147979 ~ 10151913 (+)

Expression


Co-expression Network