AMCG00014226


Basic Information

Item Value
gene id AMCG00014226
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 5679216 ~ 5698927 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014226
TGGCAAGTCTAGTCCGTGACTTTATGCTCTTTAAAAACAGACCATCAGCCGGGCGAGGCGAGCAGGGGCTTCTTCTGCGCACACACTTCCTGTGGACCCGCacgtacatacatatacactttGGAGGACTGGACACGCAACTTTATTGTTGTTTGAAGTTTTTTCCAGCTGCACAGCAATGCTTTTCCTACGGATTGTATTCCTTGCCAGCCTGACAGGCGCCGCTCTCGCCCAAGattttcatcTAGGTGATGCTTTAGATGACTTTGGAGGCCCAACCAAGCCTCCCACTCCCAAACCGAAGCCTCCACAGAATCCCGGGGGAGGTACTTTTGACCTCGGAGACGCTTTTGGTGGCCCAGCCACAACCAagcctcctcctccgcctccgaAGAAACCTGCTGGAGaTGACTTCAGTCTCGACGATGCTCTGGGTGGCGGCTCAGGTGGTGGGTCCTTCGGCGATGATGACTTATTCAATGCTGCTGGAGGAGAGTACACTCCTGACAAAGGCCACGGTGGAGcaGGCGCTGGGGATTCCACACATGgaggAGCGGAAGAACCTCAAGAAGCCGGATCTAGTAAGATCGCTGGGATTGTGAGCGCAGTGGGAGTCGCTCTGCTGGGCGCAGCGTCCAGCTATTTCGCTTATCAGAAGAAGAAACTGTGCTTCAAAGTCTCAGGGGGAGCTGACCCAGAGAGTGGAAACAAGACCCAAGCTGGAACCCACTCTGAACCTCAGGTCCTCAGCAATCTGCTCAGGACATCGTAACCCCTTCAGGAAAGCCTCATTGAAGGAATGCCGTCAACAAATCACTTTCCGAGCATCTTCTGCAAACGCCTCCCTGCCTCTGCTACCTGCGATTGGCCGAAAACGCATTTTAATTTGTAGGTTTTAAATGTTGCTGTTCTTAGAAATTGTAAACCTGGGTATGGACTCTTTATAGAAGGTCTGGTGTCATATATCATGTCTGTGTTGTTCTGTGCTCTGCTGTTTCTAACTCTTCTTAGAGGAACTGCACTCTTTTTAAGGTTactttgaaactgaaaatatacacacacgtgtTGGTATGAAAGGACCATTGTGAGTGATACTAAAGACTTCTGAAGTACAATATTGTTGTATCTCTCAGGGGGTATAAAACTttagatgcatttttttatctGTAACATATCTTTTGCATAACACACTATTTTTCGATACAATTCAAGCTAATACTGGCAAGTTTATGatgtttaaaattttatttctcatgattgcactttgattaaaaaacaagaaaacatagaCCAGAGCTGCCTTTTACAGCTGAAAATCATTAATAGAAATGCTTTTTGTACACGTTGCTTTTCTGTTccaatattttttgtgttcataGATTGCAGAATTGTATATACCTGACAGCTCAGATGATCTCACAGCTGAGGAAAGTAGCTCAGATGGCACATTTATCTTTTGAAGCCATATCTTTTAATGTTGTGTTGTAAATACTGTTGGGAGTTTGTGTAGAAAAGACTTTGGCTGTTTgctttgttgtcattttttgttttctgtgtagaCAGTGTGCAAGCGAAGAgaacattaaataatgattaacCGAATAATTGTAGCCACTGGAATACAATGCTGAgcaaagaaaaagtgtattaaACCTCAAAAGTCATCTTtaacaatgcaatatttctTTACAACACGGCATGTTCGGACACGTTTTATCCACTGACATTGTCTAAGAATCGTCTGCATTTCTTTGGAATGAGACGTGTTCACTGACACCTCAATACTGTGGAAAAGAAAGATCTCTGCGCTGATCAAACAGACTAAAACTGTACAACTGTAAATTAGCATTCAAGCTGTGCTTTTTGTAACTGTATTTCCACAAACGTGTGATggtatttagaaaatgtatgaaagatGTGTGTCACTGTGATAGTATTGCTTGTTCTGGTTGTCTACCATGTGATCTGAATAAAGTTGtgcctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014226 True 1984 mRNA 0.43 12 5679216 5698927

Neighbor

gene id symbol gene type direction distance location
AMCG00014227 NA coding downstream 23638 5644852 ~ 5655578 (-)
AMCG00014215 NA coding downstream 814898 4859257 ~ 4864318 (-)
AMCG00014212 tbl1x,LOC106582098,LOC102307724,LOC101465000,LOC102798223 coding downstream 1073255 4588397 ~ 4605961 (-)
AMCG00014211 NA coding downstream 1113272 4560163 ~ 4565944 (-)
AMCG00014210 NA coding downstream 1158817 4511821 ~ 4520399 (-)
AMCG00014231 NA coding upstream 127832 5826759 ~ 5843215 (-)
AMCG00014230 NA coding upstream 147361 5846288 ~ 5850922 (-)
AMCG00014232 NA coding upstream 165429 5864356 ~ 5866524 (-)
AMCG00014233 LOC107697803 coding upstream 187544 5886471 ~ 5891251 (-)
AMCG00014236 NA coding upstream 194284 5893211 ~ 5893946 (-)
G68547 NA non-coding downstream 91224 5587499 ~ 5587992 (-)
G68537 NA non-coding downstream 280981 5397828 ~ 5398235 (-)
G68535 NA non-coding downstream 344833 5334092 ~ 5334383 (-)
G68514 NA non-coding downstream 792933 4885925 ~ 4886283 (-)
G68474 NA non-coding downstream 1031005 4647702 ~ 4648211 (-)
G68581 NA non-coding upstream 10891 5709818 ~ 5710080 (-)
G68590 NA non-coding upstream 80558 5779485 ~ 5782392 (-)
G68595 NA non-coding upstream 126577 5825504 ~ 5825929 (-)
G68680 edar,LOC107697794,LOC107757718 non-coding upstream 355184 6054111 ~ 6056331 (-)
G68722 NA non-coding upstream 835553 6534480 ~ 6534701 (-)
AMCG00014228 NA other downstream 717 5659072 ~ 5678499 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other downstream 2284462 3385757 ~ 3394754 (-)
G68088 NA other downstream 2850072 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 3025969 2641059 ~ 2653247 (-)
AMCG00014134 NA other downstream 3136519 2531954 ~ 2542697 (-)
AMCG00014241 NA other upstream 360562 6059489 ~ 6108358 (-)
AMCG00014271 NA other upstream 1679161 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 1703225 7402152 ~ 7411890 (-)
AMCG00014278 NA other upstream 1714802 7413729 ~ 7423291 (-)
AMCG00014297 NA other upstream 2435976 8134903 ~ 8139126 (-)

Expression


Co-expression Network