AMCG00014227


Basic Information

Item Value
gene id AMCG00014227
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 5644852 ~ 5655578 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014227
ttattttgtcatccattcattcatttgctGCGGAGCTTTCCTGGAAATCTCTGGGTTGATGCGGTGTGATATAGTTTTCCTTGCACAGCTGCTGGACTCAATACGTGTCAGCCTAAAGGTTATTATTGGTCTCCATTCCTCTGTTGAAGTCATGGACCACAAACTAAACCCAAGGTTGTGTGTGCTGGCACTGCTGTTGTGCGTGGGGGGTAAAACTGCCCGTGCGGAGCGGGACTCTCGGCCCAACTTCATCCTGATGATGGTGGATGACTTGGGAATCGGCGATGTGGGATGTTATGGCAATGACACAATCAGgACCCCCAACGTCGACCGTCTCGCCCAGGAGGGGGTGCAGCTGACTCAGCACATCGCCGCGGCGCCCCTGTGCACCCCGAGCAGAGCGGCCTTCCTGACCGGCCGATACGCCATCCGATCAGgGCTGAGCAGCACTGGGCGAGTGCAGGTGCTGTTGTGGAATGGGGGGGCGGGTGGCCTGCCTCCCAATGAAACCACGTTCGCCAAGATCCTGCAGCGCCAGGGCTACACCACGGGACTCGTAGGGAAGTGGCACTTGGGTGTGAACTGCGAGAGCCGCACTGATCACTGCCACCATCCCAACAACCACGGGTTCAATTACTTCTACGGGCTGCCCTTCACGCTGTTCAACGACTGCAGGGCTGGGGAGGGCCGGGACGTGCTGGTCGACCTGCAGGACAAGCTGTGGGGTGCGTCCCTTGCGCTGAGCCTGGCGGTGCTGACGCTGGTCGGCGCACGGCTGACCGGCCTGCTGGCCACCGGCTGGAGGGTGATCGGGTCGTTGGCCACGCTCTGCATCCTGGGCTTCGCGGCGTGGCTGATGCCCTTTCATCTCATCCGCACCTGGAACTGCATCGTCATGAGGGACGGGGACGTGGTCGAGCAGCCCATGGACATGGAGACCCTGGGGCCGCGGCTTCTACACGAGGCTGAAGACTTCATCGAAAGaaaccAACAAAGACCCTTCCTGCTGTTCTTCTCCCTGGCCCATGTCCACTCGCCCCTGTTCATCTCCAAAGACTTTGTTGGAAAGAGCAAGCATGGGTTGTACGGAGACAATGTGGAAGAGATGGACTGGATGATAGGAAGAATCTTGAACGTTGTGGAAAAGCTGGACCTGTCAAGGAAGACGCTGATGTACTTCACGTCCGATCACGGGGGTCATTTAGAAGACCGTGGGGCCTGGGGTCCGAGAGGTGGCTGGAACGGCATCTACAGAGGAGGCAAAGCCATGGGTGGCTGGGAAGGAGGGATCCGCGTCCCCGGTATCCTCCGCTGGCCTGGCAGGCTGCCCGCCGGCGCCCTGATCGACGAACCCACCAGCCTCATGGATATTTACCCAACACTCGTCAAGCTTGCCGGGGGAGAGCTTCCAGGAGACAGGGTCATCGACGGCCGTGACTTAATGCCACTGATCGAGGGGAAGGTCCGCCGGTCGGAGCACGAGTTCCTGTTTCACTACTGCGGCGCGTATCTGAACGCAGTCCGCTGGCGCCCCCGGGACAGCGATGCCATTTACAAGGCCCATTTCTTCACCCCTAACTTTTACCCAGAGGGAGCGATTGGCTGTTACAACCTGAGGATCTGCATGTGTCATGAGGGCTACGTCACGCCCCACGACCCCCCGCTGCTGTTCAACCTGGCGGAGGACCCCTCGGAGTCCACGCCCCTCTCCCCCGACCGGGAGCCGCGCTTCTCCGAGGTGCTGCGCAGGGTGCGGGACGCGGTGGCCGCGCATGAGCGCACGCTGACCCCGGTGCCCCACCAGCTGTCCTGGAGCCAGATCCTGTGGAGGCCCTCCCTGCAGCCGTGCTGTGGCGGACCCTTCCCCTTCTGCTCGTGTGCGGAGGAAGAGCGGAGCACGTGACAGCATGCGACGCACAGGCTGGGGGTCTTCCGCCTCGAGGGCATCCTGAGAAACCTAAACCCTTAAGCTGGAccaaagagatttttttttttttaaatttagatgTCAAAACGTACCAACACCTTCACCTATAGATGCTGTGACTCTTAACAGGATGAATATGTGAGCCGAACGCTGCCCGTGTTTTTTGTTCCAGGGCACTTTGTTTCAGAGGAGACgagtttatttaaacaaatgaatgacGCCTGTGAGATGCGAATTGTAAACCTCACGGCTGAGTCCGTTGTTTTTACGGTTCATTGGCCTctttaatctgtgttttaatgcagCAAAAccgtaaaaaataaaagatttgaGAACGGA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008484 sulfuric ester hydrolase activity molecular_function

KEGG:

id description
K12374 ARSD_F_H; arylsulfatase D/F/H

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014227 True 2266 mRNA 0.58 11 5644852 5655578

Neighbor

gene id symbol gene type direction distance location
AMCG00014215 NA coding downstream 780534 4859257 ~ 4864318 (-)
AMCG00014212 tbl1x,LOC106582098,LOC102307724,LOC101465000,LOC102798223 coding downstream 1038891 4588397 ~ 4605961 (-)
AMCG00014211 NA coding downstream 1078908 4560163 ~ 4565944 (-)
AMCG00014210 NA coding downstream 1124453 4511821 ~ 4520399 (-)
AMCG00014204 NA coding downstream 1255659 4384145 ~ 4389193 (-)
AMCG00014226 NA coding upstream 23638 5679216 ~ 5698927 (-)
AMCG00014231 NA coding upstream 171181 5826759 ~ 5843215 (-)
AMCG00014230 NA coding upstream 190710 5846288 ~ 5850922 (-)
AMCG00014232 NA coding upstream 208778 5864356 ~ 5866524 (-)
AMCG00014233 LOC107697803 coding upstream 230893 5886471 ~ 5891251 (-)
G68547 NA non-coding downstream 56860 5587499 ~ 5587992 (-)
G68537 NA non-coding downstream 246617 5397828 ~ 5398235 (-)
G68535 NA non-coding downstream 310469 5334092 ~ 5334383 (-)
G68514 NA non-coding downstream 758569 4885925 ~ 4886283 (-)
G68474 NA non-coding downstream 996641 4647702 ~ 4648211 (-)
G68572 NA non-coding upstream 1727 5657305 ~ 5703927 (-)
G68581 NA non-coding upstream 54240 5709818 ~ 5710080 (-)
G68590 NA non-coding upstream 123907 5779485 ~ 5782392 (-)
G68595 NA non-coding upstream 169926 5825504 ~ 5825929 (-)
G68680 edar,LOC107697794,LOC107757718 non-coding upstream 398533 6054111 ~ 6056331 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other downstream 2250098 3385757 ~ 3394754 (-)
G68088 NA other downstream 2815708 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 2991605 2641059 ~ 2653247 (-)
AMCG00014134 NA other downstream 3102155 2531954 ~ 2542697 (-)
AMCG00014119 NA other downstream 3519899 2085941 ~ 2124953 (-)
AMCG00014228 NA other upstream 3494 5659072 ~ 5678499 (-)
AMCG00014241 NA other upstream 403911 6059489 ~ 6108358 (-)
AMCG00014271 NA other upstream 1722510 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 1746574 7402152 ~ 7411890 (-)
AMCG00014278 NA other upstream 1758151 7413729 ~ 7423291 (-)

Expression


Co-expression Network