AMCG00014231


Basic Information

Item Value
gene id AMCG00014231
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 5826759 ~ 5843215 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014231
ATGGATTCTGGCAGTGAGGCCGAGTACCCGAGGAAAATACTGGACTATATGGAAGGCTTCCTGGTGTCCAAGCTGCTGGTTTCAACCCTCCCACTGACCGAGCCCCCTTCTCCCCTGCAGACGCTGTTCGCCGCCTGTGAACTCGGGGTGTTTGACTTCCTGCTGGCGTCCGAGGGGCCTGTCTCTACGGCGGACGTCGCCCGGGGCCTGAGTGCCAGTGTGGACGGCATGGAGAGGCTGCTGACAGCCTGCGCAGGTCTGCAGCTCCTGCACACCCACACCCGGGACGGGGAAGCATGCTACAGCAACACAGAGGACTCAAGAATATACCTGACGAAGAGCAGCCCTAAGTCTTTATACCATTCGATCCAGTACAGCTCCAACACTATCTACTTGTGCTGGCACTACTTGACAGATGCGGTGAGGGAAGGGAAAAACCAGTATGAGAAGGCGTTCGGTGTCAGCTCCAGCGATCTCTTCGAAGCCCTGTACAGGTCAGATGAAGAGATGATCAAATTCATGCAGCTCATGAACTCCGTCTGGAATATCTGCGGCAGAGATGTTGTGACCGCTTTCGACCTCTCGCCTTTCAAGAGCATCTATGACCTTGGAGGTTGCAGCGGCGCTCTGGCCAAACAATGTGTGTCTGCGTATCCCGAGACCACGGTGACCATTTTCGACCTCCCGAAGGTGGTGCAAACGGCGAAGGAGCACTTTGTGCCGACGGATGAGAGGAGGATTTCTTTCCATGAAGGAGACTTCTTCAGAGACGCCCTGCCTGAAGCGGACCTCTACATCCTGGCCCGCATCCTCCATGACTGGACCGACGTCAAGAGCCTGGAGCTGCTTACGAAGGTCCACCATTCCTGTCGCCCAGGTGGGGGGCTGCTGCTGATCGAAGCCCTGCTGAACGAAGACCGAAGCGGACCCTTGACCACCCAGCTCTACTCGCTCAACATGCTGGTGCAGACGGAGGGGAAGGAGAGAAGCCCATCCGAGTACAGCCGTCTCCTCTCCAACGCCGGGTTCACACACATCCAGGTGCGGAGGACTGGCAAGATCTACGATGCCATTTTGGCGAGGAAGTAG

Function

GO: NA

KEGG:

id description
K00543 ASMT; acetylserotonin O-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014231 True 1089 mRNA 0.57 8 5826759 5843215

Neighbor

gene id symbol gene type direction distance location
AMCG00014226 NA coding downstream 127832 5679216 ~ 5698927 (-)
AMCG00014227 NA coding downstream 171181 5644852 ~ 5655578 (-)
AMCG00014215 NA coding downstream 962441 4859257 ~ 4864318 (-)
AMCG00014212 tbl1x,LOC106582098,LOC102307724,LOC101465000,LOC102798223 coding downstream 1220798 4588397 ~ 4605961 (-)
AMCG00014211 NA coding downstream 1260815 4560163 ~ 4565944 (-)
AMCG00014230 NA coding upstream 3073 5846288 ~ 5850922 (-)
AMCG00014232 NA coding upstream 21141 5864356 ~ 5866524 (-)
AMCG00014233 LOC107697803 coding upstream 43256 5886471 ~ 5891251 (-)
AMCG00014236 NA coding upstream 49996 5893211 ~ 5893946 (-)
AMCG00014234 NA coding upstream 53352 5896567 ~ 5906253 (-)
G68595 NA non-coding downstream 830 5825504 ~ 5825929 (-)
G68590 NA non-coding downstream 44367 5779485 ~ 5782392 (-)
G68581 NA non-coding downstream 116679 5709818 ~ 5710080 (-)
G68572 NA non-coding downstream 122832 5657305 ~ 5703927 (-)
G68547 NA non-coding downstream 238767 5587499 ~ 5587992 (-)
G68680 edar,LOC107697794,LOC107757718 non-coding upstream 210896 6054111 ~ 6056331 (-)
G68722 NA non-coding upstream 691265 6534480 ~ 6534701 (-)
G68724 NA non-coding upstream 836810 6680025 ~ 6680288 (-)
G68757 NA non-coding upstream 1147388 6990603 ~ 6990867 (-)
G68767 NA non-coding upstream 1200910 7044125 ~ 7045812 (-)
AMCG00014228 NA other downstream 148260 5659072 ~ 5678499 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other downstream 2432005 3385757 ~ 3394754 (-)
G68088 NA other downstream 2997615 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 3173512 2641059 ~ 2653247 (-)
AMCG00014134 NA other downstream 3284062 2531954 ~ 2542697 (-)
AMCG00014241 NA other upstream 216274 6059489 ~ 6108358 (-)
AMCG00014271 NA other upstream 1534873 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 1558937 7402152 ~ 7411890 (-)
AMCG00014278 NA other upstream 1570514 7413729 ~ 7423291 (-)
AMCG00014297 NA other upstream 2291688 8134903 ~ 8139126 (-)

Expression


Co-expression Network