AMCG00014232


Basic Information

Item Value
gene id AMCG00014232
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 5864356 ~ 5866524 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014232
CACTGGTTTGCCGACCAGCCCTGGTTGCTAAGAGGCGGGGATTGTTGTCGTGCGGCTCCGGGGCGGACAGGCGAGGTCTCTCACAGCAGCCGCGCCGATGAGGGATCACCCGGGGCCGCCGCCGTCAGCTGCGTTGTTAGCCCGTTTCACAGTTTCACGCCGGAGGAGCAACGCACAGCAGCCCCCTTTTGTCTGCCCGTCGTGCCAATGGCGTCCCAGTGCACCCAAGAAGCGGTGCTCCGGTACCTGGCCGAGCGAGGGGGACGTGTGAGCAACGCGGAGCTGATCGACCACTTCAAGCCCCTGCTGCCCAGCGAGCCGGCCAGCAAAGCGGCGGCCAAGGAAGCTTTCAAGGGCTTCGTGGACACCGTGGGCTTTGTGAAGCCGGAGAACGGGGTGAAATACGTGTTTCTCAAGAAGAAGTACAGGGATGCGCTGAGACCGAGCCCCGGCGGGGAGGCTGATGGAGAGAGTCGGGGTAGTGGATTAACGGGAGCGGGGCAGGTCTCTCCCACCGGTCCAGCTGTGGTTAACGGGGTTAGGAGGGACCCGGGATCTGGCCAGTCTGCATCTGCATCTGCATCTGCACGCTTTGATTCAGCTGCAGAGGTGCCTGCCAGCGAGCTTGAACTTGATCGCATACAGGGTGTGGATTCCAGCACCGATTCCCCAGCGCCGGAGAGCCTGCCTGAAGAGGAAGACGGTGATCTGGGAGCTGGCAAAGGTGTGGCACCGATGATTTCCAGGCGGAGAGCTTCCAAGGGGTCGCAGCGCAGCCTCTTATCCAGTCACCCGTCCGAGGAGGGGGCCGAGGACGGTCAGGTGGACGCGGGGGGCGACGGCTACACCCCGAGGGGCAGTAGGAGNNNNNNNNNNGAGCTGCTCATCAACAGCTCCCCCCAACTCCGGCGCAGCGTGGTTTTGAAGAACCCCGGGTCGGTGTCGGCCAGGCAGAGGGACTCGGTGAGGAGTGACAGCGACTCGGCCTCCCTGATGTCCTCCACCGATGAAGACGGTGGCTCGGTGACTCTAGACCCACTGGAGCACGAGTGGATGATGTGTTCCTCTGACGGGCACTGGGAGAGTCTCCATCGCCTGCTCTCCTGCGAGCCCAACCTCATTGTCAAGAAGGACTTCGTCACAGGCTTCACCTGCCTGCACTGGGCCGCCAAACAAGGCAAGCCGGAGCTCATCGCCTTGCTGGTCAACTTTGCCAAGCACCACGCCGTGCCACTGAACATCAACTGCCGCTCCAGTGCTGGCTACACGCCCCTGCACCTGGCAGCCATGCACAACCATGTGGAGGTGGTGAAGCTGCTTGTGGGCGCCTACGATGCCGACGTGGATGCCAGGGACTACAGCGGTAAGAAGGCCTGGCAGTACCTCGGGCACAGCGTGGCCGAAGACATACGGGAGATCGTGGGTGCGGGCGGCGACTTGGATGCCGAGAACGTGGACAACGTGGCGGGGCGCTGGAGGCTGTCCAAGGTCCTGCCCGCCAACCTGATGCCACTCAAGCTGCTCAACGTCCCCGAGGAAGATGCCTGCGACGCCGGGGGCCCCGTGAGGCCCAAGTCTGTGTACAGGAAGACCTCCATCAGCAGGATTAAGCCCAAGCTCCACAAGATCAAATTTAAGACACAGATCATTCACACCACCTCTTTCAAAGAGATGGAAGAGGGGGACAGGCCGCTGAAGAGCCCGGGGAAGTCCCGGCCCAAGTCGACTCTGTTTGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014232 True 1737 mRNA 0.62 2 5864356 5866524

Neighbor

gene id symbol gene type direction distance location
AMCG00014230 NA coding downstream 13434 5846288 ~ 5850922 (-)
AMCG00014231 NA coding downstream 21141 5826759 ~ 5843215 (-)
AMCG00014226 NA coding downstream 165429 5679216 ~ 5698927 (-)
AMCG00014227 NA coding downstream 208778 5644852 ~ 5655578 (-)
AMCG00014215 NA coding downstream 1000038 4859257 ~ 4864318 (-)
AMCG00014233 LOC107697803 coding upstream 19947 5886471 ~ 5891251 (-)
AMCG00014236 NA coding upstream 26687 5893211 ~ 5893946 (-)
AMCG00014234 NA coding upstream 30043 5896567 ~ 5906253 (-)
AMCG00014235 NA coding upstream 41618 5908142 ~ 5911400 (-)
AMCG00014238 sh3rf3,LOC106582226 coding upstream 137113 6003637 ~ 6004228 (-)
G68595 NA non-coding downstream 38427 5825504 ~ 5825929 (-)
G68590 NA non-coding downstream 81964 5779485 ~ 5782392 (-)
G68581 NA non-coding downstream 154276 5709818 ~ 5710080 (-)
G68572 NA non-coding downstream 160429 5657305 ~ 5703927 (-)
G68547 NA non-coding downstream 276364 5587499 ~ 5587992 (-)
G68680 edar,LOC107697794,LOC107757718 non-coding upstream 187587 6054111 ~ 6056331 (-)
G68722 NA non-coding upstream 667956 6534480 ~ 6534701 (-)
G68724 NA non-coding upstream 813501 6680025 ~ 6680288 (-)
G68757 NA non-coding upstream 1124079 6990603 ~ 6990867 (-)
G68767 NA non-coding upstream 1177601 7044125 ~ 7045812 (-)
AMCG00014228 NA other downstream 185857 5659072 ~ 5678499 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other downstream 2469602 3385757 ~ 3394754 (-)
G68088 NA other downstream 3035212 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 3211109 2641059 ~ 2653247 (-)
AMCG00014134 NA other downstream 3321659 2531954 ~ 2542697 (-)
AMCG00014241 NA other upstream 192965 6059489 ~ 6108358 (-)
AMCG00014271 NA other upstream 1511564 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 1535628 7402152 ~ 7411890 (-)
AMCG00014278 NA other upstream 1547205 7413729 ~ 7423291 (-)
AMCG00014297 NA other upstream 2268379 8134903 ~ 8139126 (-)

Expression


Co-expression Network