Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014236 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 5893211 ~ 5893946 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko03040 | Spliceosome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014236 | True | 420 | mRNA | 0.66 | 2 | 5893211 | 5893946 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014233 | LOC107697803 | coding | downstream | 1960 | 5886471 ~ 5891251 (-) |
| AMCG00014232 | NA | coding | downstream | 26687 | 5864356 ~ 5866524 (-) |
| AMCG00014230 | NA | coding | downstream | 42289 | 5846288 ~ 5850922 (-) |
| AMCG00014231 | NA | coding | downstream | 49996 | 5826759 ~ 5843215 (-) |
| AMCG00014226 | NA | coding | downstream | 194284 | 5679216 ~ 5698927 (-) |
| AMCG00014234 | NA | coding | upstream | 2621 | 5896567 ~ 5906253 (-) |
| AMCG00014235 | NA | coding | upstream | 14196 | 5908142 ~ 5911400 (-) |
| AMCG00014238 | sh3rf3,LOC106582226 | coding | upstream | 109691 | 6003637 ~ 6004228 (-) |
| AMCG00014240 | NA | coding | upstream | 189441 | 6083387 ~ 6104883 (-) |
| AMCG00014242 | LOC106582183,LOC103353988 | coding | upstream | 215413 | 6109359 ~ 6124346 (-) |
| G68595 | NA | non-coding | downstream | 67282 | 5825504 ~ 5825929 (-) |
| G68590 | NA | non-coding | downstream | 110819 | 5779485 ~ 5782392 (-) |
| G68581 | NA | non-coding | downstream | 183131 | 5709818 ~ 5710080 (-) |
| G68572 | NA | non-coding | downstream | 189284 | 5657305 ~ 5703927 (-) |
| G68547 | NA | non-coding | downstream | 305219 | 5587499 ~ 5587992 (-) |
| G68680 | edar,LOC107697794,LOC107757718 | non-coding | upstream | 160165 | 6054111 ~ 6056331 (-) |
| G68722 | NA | non-coding | upstream | 640534 | 6534480 ~ 6534701 (-) |
| G68724 | NA | non-coding | upstream | 786079 | 6680025 ~ 6680288 (-) |
| G68757 | NA | non-coding | upstream | 1096657 | 6990603 ~ 6990867 (-) |
| G68767 | NA | non-coding | upstream | 1150179 | 7044125 ~ 7045812 (-) |
| AMCG00014228 | NA | other | downstream | 214712 | 5659072 ~ 5678499 (-) |
| AMCG00014181 | ppef1,LOC105893339,LOC108425737,LOC107695075 | other | downstream | 2498457 | 3385757 ~ 3394754 (-) |
| G68088 | NA | other | downstream | 3064067 | 2825562 ~ 2829144 (-) |
| AMCG00014144 | NA | other | downstream | 3239964 | 2641059 ~ 2653247 (-) |
| AMCG00014134 | NA | other | downstream | 3350514 | 2531954 ~ 2542697 (-) |
| AMCG00014241 | NA | other | upstream | 165543 | 6059489 ~ 6108358 (-) |
| AMCG00014271 | NA | other | upstream | 1484142 | 7378088 ~ 7386984 (-) |
| AMCG00014276 | LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 | other | upstream | 1508206 | 7402152 ~ 7411890 (-) |
| AMCG00014278 | NA | other | upstream | 1519783 | 7413729 ~ 7423291 (-) |
| AMCG00014297 | NA | other | upstream | 2240957 | 8134903 ~ 8139126 (-) |
