AMCG00014243


Basic Information

Item Value
gene id AMCG00014243
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 6234803 ~ 6239921 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014243
ATGGCGTCGCGCTCCTTCACCCTCATCCCGGCGCACAAGTACCGGCGCAGCGGCCGCAAGCAGGGTCCGAGCATTGGGGCGGCGCGGCGCCAGCGCAGGTCCACCTGGGGCCGCTTCGAGAAGATCCCCGCCGAGGCCGTTGGCGCCTACGTGGTGAGGCAGGTGTCCACGCTGGCCTGGAGGAGCAGGATGTTCGTGCAGGAGTTCCACCCGGCCCGGCCGTCCAGCCAGGAGGACTGCATCCTCGAACACTACAAGTGTCTGGGTTTATTGTTCAAGAGATGCACCCTCTTACTACCAACCAAGGACCGGTTAAAGTTTATCTACGGCAACTTTTCCCAGCGCTGCGCGGTGCATCCGGTGTGCCTGGGGTTCGCCAGCTTTGGGGCGTTTCTGCAGACGCTGATAGCTGGCTGGGACGAGCTGGAGTGTCACCGCGTCTTCAACTCCCTGTGCGAATTCACCAACCTGCCGCGCAAGATTCAGACCGCGGTGGCCAGCAAGCCAGGGGCCTCTGAGAAGCTGGAGGGGCAGATCCGGCTGTTCTGCAGGAGTGTGCTGCTGGACCCCTGGCTGAGCCGCAGAGACACGCTGTTCTGGCTGACCCGCATCCTCAAGCCCTGGCCCATGGTCAACCAGGCGCGCCTGCTCTTCATCTTCTACGGCCCCCTCACCCTGGATGGCAGGATCGGGTGGCAGAGTCTGTGCGACACCGTGGTGGCTGAGTGCAGTCTGTGGGACCTGGCAAAGGCACTCAAGCTGCTCTACAACGATCCCGAGACCAAGGAGTGGACGACCGACAGCGTCATCAGCCTCATCGAGGAACTGACAGTGCTGCCGGGAGAGTGGCTGCAGGAGAACGTGGCGCGGCTGCTCATCCTCTGTGGGAACCGCACCTGCTTCACCTTCATGGCTAGCCGGGCGCTGAACGGCCGCGTGGCGGAGATCGCGCGGCTGCTGGTGTTCCTGATCCTGGTGTGCGAGAAGGACGGTTACTGCATGAACTGGTCCGTGAAGATGATGCAGCAGATCAGCAGGGTCTTCCCCGGCTCCCCGGAGCGCTGGTCCTTCGTCCAGAGCGTGGAGAACGTGTTCTCTCAGGTCACCATGCAGATGTACGAGTCGCTGATGGCCGGCGGGCGGGAGGCTGAAGCCGACACGTTCCAGAACCTGTGCAGCATCCTGAACGCCAGTGCCCACTTCCACACCGAGATGGTCTACATGATCATCAAGGGCGACTGA

Function

GO: NA

KEGG:

id description
K10321 FBXO47; F-box protein 47

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014243 True 1242 mRNA 0.63 10 6234803 6239921

Neighbor

gene id symbol gene type direction distance location
AMCG00014237 NA coding upstream 180368 6033437 ~ 6054435 (+)
AMCG00014229 sept10,LOC105911973,LOC107697805,LOC108430022,LOC103039444 coding upstream 355546 5866905 ~ 5879257 (+)
AMCG00014224 NA coding upstream 460042 5755529 ~ 5774761 (+)
AMCG00014225 NA coding upstream 494882 5721897 ~ 5739921 (+)
AMCG00014223 NA coding upstream 591314 5607773 ~ 5643489 (+)
AMCG00014253 NA coding downstream 491703 6731624 ~ 6732517 (+)
AMCG00014259 NA coding downstream 799833 7039754 ~ 7046875 (+)
AMCG00014260 LOC107688668 coding downstream 810415 7050336 ~ 7054907 (+)
AMCG00014261 NA coding downstream 833403 7073324 ~ 7073602 (+)
AMCG00014267 pou1f1,LOC107688653,LOC107551978,LOC107661330 coding downstream 989152 7229073 ~ 7237562 (+)
G68686 LOC106586545,LOC106582186 non-coding upstream 28227 6204178 ~ 6206576 (+)
G68665 NA non-coding upstream 119839 6112656 ~ 6114964 (+)
G68649 NA non-coding upstream 124497 6073717 ~ 6110306 (+)
G68637 NA non-coding upstream 178456 6054535 ~ 6056347 (+)
G68635 NA non-coding upstream 221744 6012682 ~ 6013059 (+)
G68698 NA non-coding downstream 4981 6244902 ~ 6247049 (+)
G68728 NA non-coding downstream 473250 6713171 ~ 6714821 (+)
G68738 NA non-coding downstream 503942 6743863 ~ 6744111 (+)
G68771 NA non-coding downstream 816786 7056707 ~ 7058319 (+)
G68904 NA non-coding downstream 1386067 7625988 ~ 7626404 (+)
G68475 NA other upstream 1582839 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 2103085 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 3524474 2706840 ~ 2710329 (+)
G67896 NA other upstream 4104658 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 4332116 1900220 ~ 1902687 (+)
G68830 NA other downstream 1106274 7346195 ~ 7349467 (+)
G68848 NA other downstream 1173719 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 1224582 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 3763137 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 3908058 10147979 ~ 10151913 (+)

Expression


Co-expression Network