AMCG00014255


Basic Information

Item Value
gene id AMCG00014255
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 6710219 ~ 6717932 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014255
ATGCTCTCCGCCGTCTGCGCCCGAGGAGGGGGCCACGCGCCGCACGTGCCACGGGGGGCGGCTCGGCGTCTGCACGCGCAGGTGAGGACGCAGCGACTTCCGGGTTCGGCTGCCCGGGGTCCGCACACGTGGTCGCGTGTCTGCGGGACTGGGTCCGAGGCGCACCGGGCAACAATGACACATCGCCCACGCCATGCGGGCAGCGCTGTGCTGCGATCGCGCTGCTTAACGGCCGTCTCTCGCCGTCTCGCGCAGCGCGGCCCGGGCCAGAGGCGGCTGTGTGAGCCGGTGCTGCAGCTCTTCGACCGGCAGTACTCGGAGGAGCTCGGGCCGCTCTGGACCACCGCCAGGGAGGTGCTGTGCCAGCCCCAGTGCTGGCAGTACGCCGTCATGCTGAACCGCTTCTGTGCGTCGGCCGAGCTGCAGCCGCGCCTCCGGGCCCTGGGCTACTCCGGCCTCCTGCCCCCGGCCTCCAGCCCCCTGCGGTGCTTCGTGCACCCGGCCCCCCTACGCCTGCCCTCCCAGCGGCACCGGCCCGGCCAGCTCAAGCCCTACTTCCTGCTCAACGCCGCCTCCCTGCTGCCCGTGCTGGCGCTGGGCGCGGCGGACGGGGAGTCGGTGCTGGACCTGTGCTCGGCCCCGGGCGGCAAAGCGGTGGCCGTCATGCAGAGCGCCACCCCAGGTCTGTTACTTTGCAACGAGTGGGACGGGCGGCGCTGGAAGTGGCTGGCGGAGACTCTCGAGTCCTTCATCCCGGCGCGCTTCAGCCACGCCGTCCAGGTGTCTAACCGAGATGGACGCGTCTTTGGGCGGATCGCAGAGGGCCTGTATGACAAGGTGCTGGTGGACGCCCCGTGCTCCAACGACCGCAGCTGGCTGTTCTGCCCCGGGCCGGACCGGGGCGCCGAGAGGATACGGGGGCGGGAGGCGCTGCCCGAGCTGCAGACACAGCTCCTCAGGCCCGGGGGCGCGCTCGTCTACTCCACCTGCACTCTGTCCCGCGCGGAGAACGGCGCCGTGGTGGAGGCGCTGCTGCGCTCCTGCCCCTCGCTGCAGCTGGAGGACCTGGGCGGGCTGGCAGACTCCCTGGCGCAACACTTCACCTTCGCACCCCCTGCCGGCCCTGGCCTGCTCGTGGTCCCCGACGCCGGCCGGACCTGGGGGCCCATGTTTGTGGCGAAGATGAGGAAGCTCCACTGA

Function

GO: NA

KEGG:

id description
K21969 NSUN3; tRNA (cytosine34-C5)-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014255 True 1200 mRNA 0.72 6 6710219 6717932

Neighbor

gene id symbol gene type direction distance location
AMCG00014252 LOC106586540,LOC106582188,LOC101465476 coding downstream 295383 6399468 ~ 6414836 (-)
AMCG00014250 epha6 coding downstream 369810 6334515 ~ 6340409 (-)
AMCG00014251 epha6,LOC108437778 coding downstream 407473 6285340 ~ 6302746 (-)
AMCG00014248 LOC106936474,LOC106903720,LOC105936159 coding downstream 434719 6263950 ~ 6275500 (-)
AMCG00014245 epha6,LOC108437778,LOC101465476 coding downstream 456338 6252371 ~ 6253881 (-)
AMCG00014254 arl13b coding upstream 387 6718319 ~ 6739267 (-)
AMCG00014256 NA coding upstream 34927 6752859 ~ 6755633 (-)
AMCG00014257 epha3,LOC107549902,LOC107676997 coding upstream 96249 6814181 ~ 6860542 (-)
AMCG00014258 epha3 coding upstream 169094 6887026 ~ 6888090 (-)
AMCG00014263 NA coding upstream 322799 7040731 ~ 7042716 (-)
G68724 NA non-coding downstream 29931 6680025 ~ 6680288 (-)
G68722 NA non-coding downstream 175518 6534480 ~ 6534701 (-)
G68680 edar,LOC107697794,LOC107757718 non-coding downstream 653888 6054111 ~ 6056331 (-)
G68595 NA non-coding downstream 884290 5825504 ~ 5825929 (-)
G68590 NA non-coding downstream 927827 5779485 ~ 5782392 (-)
G68757 NA non-coding upstream 272671 6990603 ~ 6990867 (-)
G68767 NA non-coding upstream 326193 7044125 ~ 7045812 (-)
G68773 glrx,LOC100698576,LOC103359009,LOC108424411,LOC103461279 non-coding upstream 335999 7053931 ~ 7054306 (-)
G68774 NA non-coding upstream 336845 7054777 ~ 7058319 (-)
G68826 NA non-coding upstream 570131 7288063 ~ 7288335 (-)
AMCG00014241 NA other downstream 601861 6059489 ~ 6108358 (-)
AMCG00014228 NA other downstream 1031720 5659072 ~ 5678499 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other downstream 3315465 3385757 ~ 3394754 (-)
G68088 NA other downstream 3881075 2825562 ~ 2829144 (-)
AMCG00014144 NA other downstream 4056972 2641059 ~ 2653247 (-)
AMCG00014271 NA other upstream 660156 7378088 ~ 7386984 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other upstream 684220 7402152 ~ 7411890 (-)
AMCG00014278 NA other upstream 695797 7413729 ~ 7423291 (-)
AMCG00014297 NA other upstream 1416971 8134903 ~ 8139126 (-)
AMCG00014298 NA other upstream 1438000 8155932 ~ 8158590 (-)

Expression


Co-expression Network