AMCG00014259


Basic Information

Item Value
gene id AMCG00014259
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 7039754 ~ 7046875 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014259
CTCGccagaacagaaagaaaacaggacCCTTCCCTTTTACTTTCTGTAATTTATCACCTTACATATATTTGTTACAGTAGAAGTTCAACACTAGTCTTAACACATAGCAGCCTCTCAAACCTCAGTCATTACTGTGCGCtggcactttttattttcagtcattttctaTGGCTTTCACACCTGTCTTCCATTAGACGGAACAGAGCGGTCAGCTTTTCCAAGACAAAGTGGGAATGCTGTGACGGCGGACGACTGAtctttttggtttattttacgGTTGAGCGACTTTAATAACCCCGAGCAGGTTCTGTCGTGTGCTTTCGCTTTGCTTTTGGATACCGAGTCTGAACTTCACGTAGTGGTCTTCACCCTGCACAGAGACCGATCCGCCTGGCCTGCCACATGCCCTGATTGAAAGGGTGAAAGGTCAACTGATAACTGGGCACCATGCAAGATTTAAAAACTGACCCTCTAAGAACACGCTGTCCGGTAGAATTGACTCCTTTCTCTGCTTACGTGTCAAAAACTATGAGCGTAGATCTcatcacaaaaaaacagaacgaACGGCGCTTCCcacagtttttattgttttgctgcaAATGCTTTTTCTGTGCAGGACAGCAGATGCACATACATGTAGTCTGTACACGTGTGTGTTGTGGTTTAACACAGAAGCAGACTTGTTTTCAGCTCttttataacattttgaccCATGTAATCCACCCATTTCTTGTTCATGTCATCTGTAGGTTCTTCTCCAAAAATATCCCTCTCTAACTAGACTTTGGTATGAATGTAActcttataaaaataataaaaaataaattagaaatgaaGAGTTTGCACTAGgctgattgttgttttttttttttgaaactCTTTCtacaggacaaaaacaaaataaaatctctttaCATAAAGTGCTCTTCCCCACCTtcgtatatatatgtacaacaCACCTCATCCACCCCACAGTCTCAACCACAGAAGAGCCGCAGCTCGCTGGGCTCGTAGGTCACCGCCGGCGCTGGTACCGGCTCCCCGCCCTCCAGCGCGCTCTGCCCCCTGATTTTCAAGTTCAGGAATTTGATCTTCCAGCTGTTGGGGCCGGTGGGGGTCCGGATCAGGCCGAACACCTGCTCGAAGACCCCCAGGCACTTTCGCTCGCGGTGGATCGTCCCGGCCAccgccaccaccaccagcccGTGCGCCGAGGACACGCACTTCAGACCGCGGGGGTCCAGGTTGGGGCTGAGGAACAGCTGCTCGTCCCGGGCCAAGGCCAGCAGGCGCAGGCTCACCAGCTCCGCGCCCCGGTActcctccagctgctgctcGGCCGTGCTGTAGCAGAACTGCAGCCGCGCGTCGTCCCAGAAGTGCTGCGGCCCCCAGTCCTGCCGCGTCTGCCCCAGCGCGGGGTTCTGAGAGTTCAGAAGCTGGAAGAACCACTGGCAGAACTGGTCCCCCAGCGCCTGGCACTCGGCGGCCTGCTCCCCCCGGCCCGGCGCCGTCTCCGCCCTGCCCTCCGCCTCCACGGCCCGGCCGCTCGGCTTGGGGGCCTGCACAGCCGTCCCCTCCGGACCCCAGTAGTCCAGCGCCGTCTTGATGAGCTGGTGCTTCTCGGACGTGGGCGGCAGCACGACGCCCTCCTTGGCCAGGTAGCGGAAGATGAAGTCGCGGTGAACCTTCTTGCGCCGCAGCAGCTCCTCGGCGCTCTGGCTGTAGGCCAGGATGGCATGGAGGGCCTCTTGGCTGCTCTCCACGGTGATCATGCGGTTGGTGACGGTGTCCTTCAGCGCCAGCAGGTCCGGCTCGGCGAGGCTCTGGAGGATCTCCGTGCAGCCCGCCTTCTGCCTCTCGGACAGCCCCGACATCTCCTCTCAGTCGCCCCGGAGCAGCGCCACAAACCAGCCGATCCCCGCCTCGCCTCCGCGGCAGAGCCCGTCGCTGCGCGGCTCCGGGGGGACACAGTCCCGCAACAAAGGTTCCGGGACCGGACTGACACGACCTGGCGTCAATGCGCATGCTCCACATCACgtcattacatatatacatccaTTGGTACTGAAGAGCATACGCTCACACGATTAACAAGGCGCTGTGCCATATTATTCATCGTAGTCGTAACAGTATCGTGTGTATGTGCGAACATGCGCAGTTCTGTACTGTAAACAGTGTGTATACCACCTTAAGAATCGTCACGCAGGATGATTGACATCTAGGTTCCCAATCAAAGTGCCGCCTAAGGGGTGTTCTGATTGGTTGAGAAGGCGCAAAGGAGGGCGGAAGGTAAAACATGCGGAGCGCAGAGTAGCGTCAGCTTTATAATGTTACCTATTGAGCTTTAATCCCGTGGTAGCGGGGAGGATAGTGCGTGTGTGTCTTGTAATGGGTTCTCTGGGTGTGCAGTTGTGCCACAGATGTTGCTTCCTGCGGGTCAGAACTCTGCTCACAGCGTTCCAAAGAGACCGAACTCTGCGTTCTAGAAGCCTGCGGGTCTCGCTGGCCCGCGCCCAGGGAGGCCTGCTGTCTGTGAACCCGCACCGCGCCGTGCGCCTGGAGAGATGGAGGGGCGACCACCTCAGTGTACTCTCCTCCCGGAGGGCAAGTCAGCAACCCGCTGATGAAACTGCAGTGGCTGCTTCGCCGGGATCTCATCTGCTTCCTTATGAAAACTGTCACCTTGAGGACACAGTGAGGAGCGATCCCACCCCCGAGAGGCCACTCGTGGAATTGGATGCAGTTCCACCTCCGTCTCCGTTCGAGGAGATCACTGATGAAGACGCCTCGCAGATCAGTGTGGACCCGGGGCTGAGTCCAGTTTCGGTCTCGCTGAGGGACTATGTGAACCAGTCAGAGACGCTGCGCAGACTGGTGCTGCTCGGCGTTGACCTGTCTAAGCTGGAGCGGCGCCCCAATGTCGGGAACATGCTTCTGCGCTTGGACTTCGAAAAAGACGTCCAGGAACGACTGCTCTTCCTCAGAGACGTTGGTGTGGAGGAGATGCATCTGGGTCCTGTCCTCACCATAAATCCCTTCATTCTCACAGAAAACATGAAGAACCTGCAAGCAAGGGTGTCTTACCTGAGGCTCAAGAGGTTCAGCGCCGATGCAATTGCTCGAATGGTTTCCAAAGCTCCTCACCTGCTAAACTTCAGTGTGGAGAGGCTGGACAAcagactgagtttcttccagAAGCAGCTTGAACTGAATGTACAAAAGACGCAGGACCTTGTGACGCGTTTCCCCAGGTTGCTATGTGGGAAACTGGACCCGGTGAAAGAGAACCTCAAAGTGTGCGAAATGGACCTGGGGTTCCGGAAGAATGAGGTCCAGCACATGGTCACCAGGGTGCCGAAGCTTCTGACGACCAACAAGAAAAAACTCACCGGGATCTTCGACTACGTACACAATACGATGGGAATTCCACACTCTCTCATTGTGCGATTCCCACAGgTGCTGAATGCAAGGCTTCTGAGGATCAGAGAGAGACACTTGTTCTTGAAACACTTGGGCAGAGACCAGTTCGACCTGGCTGAGCCCAACTACGTCTCTCTGGACCAGTTAGTCTCGCTGCCCGATCATCTCTTCTGCGCCACTATCGCCCTGGCTTCTCTCGAGGACTTTGACGTGTTCCAGAAGACACTTTGATTTAAAACCTACAGATCTGACAACAAGTCCTGGATTACTTAATATCAAAGTCTGTGAAACTACTTTTGATAAGTACTTTTTGAATTTgcacatttcctgttttgtgttAAGCTTATGAATATTgcc

Function

GO: NA

KEGG:

id description
K15032 MTERFD; mTERF domain-containing protein, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014259 True 3780 mRNA 0.54 9 7039754 7046875

Neighbor

gene id symbol gene type direction distance location
AMCG00014253 NA coding upstream 307237 6731624 ~ 6732517 (+)
AMCG00014243 NA coding upstream 799833 6234803 ~ 6239921 (+)
AMCG00014237 NA coding upstream 985319 6033437 ~ 6054435 (+)
AMCG00014229 sept10,LOC105911973,LOC107697805,LOC108430022,LOC103039444 coding upstream 1160497 5866905 ~ 5879257 (+)
AMCG00014224 NA coding upstream 1264993 5755529 ~ 5774761 (+)
AMCG00014260 LOC107688668 coding downstream 3461 7050336 ~ 7054907 (+)
AMCG00014261 NA coding downstream 26449 7073324 ~ 7073602 (+)
AMCG00014267 pou1f1,LOC107688653,LOC107551978,LOC107661330 coding downstream 182198 7229073 ~ 7237562 (+)
AMCG00014266 NA coding downstream 231247 7278122 ~ 7285235 (+)
AMCG00014273 tomm70 coding downstream 398141 7445016 ~ 7455956 (+)
G68738 NA non-coding upstream 295643 6743863 ~ 6744111 (+)
G68728 NA non-coding upstream 324933 6713171 ~ 6714821 (+)
G68698 NA non-coding upstream 792705 6244902 ~ 6247049 (+)
G68686 LOC106586545,LOC106582186 non-coding upstream 833178 6204178 ~ 6206576 (+)
G68665 NA non-coding upstream 924790 6112656 ~ 6114964 (+)
G68771 NA non-coding downstream 9832 7056707 ~ 7058319 (+)
G68904 NA non-coding downstream 579113 7625988 ~ 7626404 (+)
G68982 NA non-coding downstream 827652 7874527 ~ 7874742 (+)
G69006 NA non-coding downstream 967869 8014744 ~ 8015003 (+)
G69023 NA non-coding downstream 1086413 8133288 ~ 8136210 (+)
G68475 NA other upstream 2387790 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 2908036 4127476 ~ 4131718 (+)
AMCG00014146 NA other upstream 4329425 2706840 ~ 2710329 (+)
G67896 NA other upstream 4909609 2126872 ~ 2130145 (+)
AMCG00014111 NA other upstream 5137067 1900220 ~ 1902687 (+)
G68830 NA other downstream 299320 7346195 ~ 7349467 (+)
G68848 NA other downstream 366765 7413640 ~ 7416594 (+)
AMCG00014272 tbc1d23 other downstream 417628 7464503 ~ 7482560 (+)
G69406 tgfbrap1,LOC102780916 other downstream 2956183 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 3101104 10147979 ~ 10151913 (+)

Expression


Co-expression Network