Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014261 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 7073324 ~ 7073602 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030054 | cell junction | cellular_component |
| GO:0016020 | membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014261 | True | 279 | mRNA | 0.64 | 1 | 7073324 | 7073602 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014260 | LOC107688668 | coding | upstream | 18417 | 7050336 ~ 7054907 (+) |
| AMCG00014259 | NA | coding | upstream | 26449 | 7039754 ~ 7046875 (+) |
| AMCG00014253 | NA | coding | upstream | 340807 | 6731624 ~ 6732517 (+) |
| AMCG00014243 | NA | coding | upstream | 833403 | 6234803 ~ 6239921 (+) |
| AMCG00014237 | NA | coding | upstream | 1018889 | 6033437 ~ 6054435 (+) |
| AMCG00014267 | pou1f1,LOC107688653,LOC107551978,LOC107661330 | coding | downstream | 155471 | 7229073 ~ 7237562 (+) |
| AMCG00014266 | NA | coding | downstream | 204520 | 7278122 ~ 7285235 (+) |
| AMCG00014273 | tomm70 | coding | downstream | 371414 | 7445016 ~ 7455956 (+) |
| AMCG00014274 | nit2 | coding | downstream | 410460 | 7484062 ~ 7489351 (+) |
| AMCG00014281 | lancl3 | coding | downstream | 564219 | 7637821 ~ 7642535 (+) |
| G68771 | NA | non-coding | upstream | 15005 | 7056707 ~ 7058319 (+) |
| G68738 | NA | non-coding | upstream | 329213 | 6743863 ~ 6744111 (+) |
| G68728 | NA | non-coding | upstream | 358503 | 6713171 ~ 6714821 (+) |
| G68698 | NA | non-coding | upstream | 826275 | 6244902 ~ 6247049 (+) |
| G68686 | LOC106586545,LOC106582186 | non-coding | upstream | 866748 | 6204178 ~ 6206576 (+) |
| G68904 | NA | non-coding | downstream | 552386 | 7625988 ~ 7626404 (+) |
| G68982 | NA | non-coding | downstream | 800925 | 7874527 ~ 7874742 (+) |
| G69006 | NA | non-coding | downstream | 941142 | 8014744 ~ 8015003 (+) |
| G69023 | NA | non-coding | downstream | 1059686 | 8133288 ~ 8136210 (+) |
| G69206 | NA | non-coding | downstream | 1660721 | 8734323 ~ 8735939 (+) |
| G68475 | NA | other | upstream | 2421360 | 4649200 ~ 4651964 (+) |
| AMCG00014196 | NA | other | upstream | 2941606 | 4127476 ~ 4131718 (+) |
| AMCG00014146 | NA | other | upstream | 4362995 | 2706840 ~ 2710329 (+) |
| G67896 | NA | other | upstream | 4943179 | 2126872 ~ 2130145 (+) |
| AMCG00014111 | NA | other | upstream | 5170637 | 1900220 ~ 1902687 (+) |
| G68830 | NA | other | downstream | 272593 | 7346195 ~ 7349467 (+) |
| G68848 | NA | other | downstream | 340038 | 7413640 ~ 7416594 (+) |
| AMCG00014272 | tbc1d23 | other | downstream | 390901 | 7464503 ~ 7482560 (+) |
| G69406 | tgfbrap1,LOC102780916 | other | downstream | 2929456 | 10003058 ~ 10008648 (+) |
| AMCG00014345 | NA | other | downstream | 3074377 | 10147979 ~ 10151913 (+) |
