AMCG00014282 (xk)


Basic Information

Item Value
gene id AMCG00014282
gene name xk
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 7645418 ~ 7653546 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014282
ATGGTAACTGCATCCCTTGTGCCCGACCGCGGCGCTGGACCACTGCGCGCCTCCGCCTCATCACTCGCCTGTGCGGGATGGGAGCGCCGGTGCGCCTTTAGGAGACGAGCTCCCTCCTCCCCCGATGGCCATGCAAGCATGAGACTCCCCAGCTCcatctttgtgtctgtctcgCTGTTCACTGCCGAGACCACCGCCGCGCTGTACCTGAGCACCACGTACCGATCTGACGGGGACAAGATCTGGCAGGGGCTGACGCTGCTGTTCGCGCTGGTGCCTTCGGTGCTGGTCCAGCTCACCCTAACCTTTATACACAGGGACCTGAGCCGGGATAGACCCCTCGTCCTGCTGCTCCATATTCTGCAACTGGGACCGGTTGTCAGGTGTCTGGAAGCATTCTGCATATATGGAAAGGCAGGTCAGATCGAAGAGCCATATGTCAGCATTACGAGGAAAAAACAGATGCCCAAAGACGGTCAGTCCGAAGAGGTTGAGAAAGAAGTGGGGCAGGCAGAGGGGAAACTCTTCACCCACCGCGCTGCTTTCGCCCGGACGTCGGTGATCCAGGCCTTTCTGGGCTCTGCACCCCAACTCACACTTCAGCTTTATATCTGTGTGCTGCAGCAAGCGGTGTCCATAGGAAGAGGTACGTTGATGGTGATTTCCCTGCTGTCGATAGTGTACGGGGCTCTGCGCTGCAATATCCTCGCCATAAAGATTAAGTACGATGATTACGAGGTGGACGTGAAGCCCGCAGCATACCTGTGCATCTTCCTCTGGAGGAGCTTTGAGATCGCCACTCGAGTGGTCGTCCTCGTGCTCTTCAGCTCGGTGCTGCAGATATGGATTCTCCCGGTGGTGCTGCTCAActtcttcgtcttcttcttTTACCCCTGGATACTCTTCTGGCAGAGCAAGTCCCCGTTCCCGGAGAACATCGAGAAGACCCTCACTCGGGTGGGCACCACGATCGTCCTGTGCCTGCTGACCTTCCTATATGCCGGCATCAACATGTTCTGCTGGTCCGCGGTCCAGCTGAAGCTCAACGACCCCGACTTGATCAACAAGTCGCAGAACTGGTACCGGATGGCGGTGTATTACATGCTGCGGTTTGTTGAGAATGCCACGCTCATTTTGTTGTGGTACGTTTACCAGACCGAGTTCTACAAGTTCATATGTGCCCCCCTGCTCGTCTTGCAGCTCCTGATCGGTTACTCCATCGGCATCTTTTTCATGCTTGTGTTCTACCAGTTCTGCCACCCTTGTAAAAAGCTGTTCTCCTCCAGTATTTCCCAGGGACTCTGGGCGTGCTCAAACTTTCTCTGCATGATCTGTAAGCCCCCCAAACAAGGGGAGTCTGTTGACAAGACTACACTGGACCCACCCAGTTACACTGACAAAGACATTGCCAACGATACTATGAATGAGACTCTGAATGGGAAAACCAGCCAGAGTTTTTCCAGCAACCCTTCAATACTGAAGGACACACCAGAAGGCCCCTGTCTCAATGTGTGATGCACTCTGAAAGCCAAATGAAGGCACAGGTTCacagcaaaatgtaaaatgggaAAGCAACACCATAGCAGTCATGCACTTTTCCAGCAATTCTTATAAATATGGATTTCAGGGGAGACATTGGCCCATCAGCAATGCAAAGGAAAACCTATTCTAGATGTTGATTTCCCTTGTGTTACCAATACACAAAAGAGCAACTGTTTTCATTCCAAAAGAGTAATGTGCTAGAAATTCAGATAATTAAGAAGTCACCTGATTTCATACAGATTCCTCTTCCATCTCTTTGagctccaaaataaaatattcctaGTTATTTAACTCCAAGATATAATTAACTCTGTTGGCAGAAACCATACTGTAGGGGATGGGAATATTTCTGCTTGGTTCTGTAACTTTCGAATGTACATTTCAGTGCTCTTGCATTATGAAATATGAAGcgcaaaataatatgaattgagTGTTTACTGCCTGGGTAAGTTTTCTGGTTTCAAGTATTCAATTATTTGCATCCTAAGACAAATACTACTCAATGCAAGTTTTTCAATTTTATCTGCTACACTACAATTCAACAGCCCTGAAAACCAGTACAGCTAAATGTCTGTCTATGAGGCCAAGTTGAATATTTGGATAAGACTTCAATTACCGCAAAGagtcattttgtaatttgtttatctCTAAGAAGATTTTGCACAATTAACTAACAATTATAAATCCATATCGCATACCACTGGTATTCAAATACGGGACATTCAGTCATTTTTCCATCCACAGAccattaataaacatataagGCAAAGTTATAAacgaatacatattttttaacattattttaatgtgtgccTATGATTACAGCTGTTCTTTTTCAGGTTCTATGGCTGTGCCTTGTCAGTGattagtatttatttgcatatgcaAAAGAGAACCAttctcaaattcaaaacaataatCTTATAATGATAGAATACGAATTCATACATCTCATAGACTCTgttcaagtttttatttttatgctgcGACAAAATGGCTGCCCTGACCTGAAACTATTAACCATTCATAGTGTTTCTATGAACTATTGAGCAGACATTtctggagagaaaaaaggaacaaGTTCAAAATACACTTACtgctgtatatatgttttattattaaattacatataatgTGAAAGAAGTAAATGTGCACATTCTGCCAGCTCTTGTTTCTTTGCTCTCGATGCATCGTTGCACATGCCTGCACTTACTTCGTAACTAACCGAGTATAAAGACAGAACCACCAGAAGGGCACGCAATGTGTTCAGGGAATTAATTACCTGCATGAACTATTAGAGAGTCTTCGTCCATAGTTTCTACCACATGTCCTGTTTTGGGGTATTATATGATATTCTCTGTTGTGGCATCTATTTAGATTATTTTCTGTACAGAGGGAATACATTTGGGAAAGTATCTCAGCATTCATCAGGTATAATTCTTCAGTGGGTTTCTCACATTGGGATGCTATTTTTCTTGGCTTGTATGGCCAGTAGAAgaaacatatacaaaaataacagaacagaatacTTTATAACATACATCACCGTTCACAACAAGTGAAAGATGAAAGATGAATTTTGGCAGTGCTATGAGCCGCCCATTTACGCTGCAATCACGAATGTGCTTATTCTGACGGGATCATTTATTCTGCTGACCTCTAGTGGCCAAAGATAATGATACGGTTTACTGTACAAGGAAACACAAagtactgtacttgtgtaatgTCCATGTATACTTCACAGCCCACTGTATGCCACACCCTGGCCCTcgaacaatacaaaaaacaaaggtgTTTCATTACATCtgtgtttgaaataattaaaaaaaatacaataaggtATAAGGATTGCATTTCTCACAGAATTGATTTCAACATTGGATGTGAAGTAAAACAGGGAATTTGTGGTCAGACCACAGTGCTTGTACTGTGTTGTAAGGCTTGTACCTAAACCTGCTGTGTATTaactgtgtgtcagtctgtttgtactgtatttgaCTGTGTTATGTGTGATGTGTGGTGACTGGCTAACCTTTTCCAGTGTTTGGTATTTACCAGTGTACAATTTCATACAATATTGAAcagttaatttatatataaaaaaattatatatatatatatatata

Function

symbol description
xk Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in McLeod syndrome and hematopoietic system disease. Orthologous to human XK (X-linked Kx blood group).

NR:

description
PREDICTED: membrane transport protein XK

GO: NA

KEGG:

id description
K19522 XK; membrane transport protein XK

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014282 True 3668 mRNA 0.43 3 7645418 7653546

Neighbor

gene id symbol gene type direction distance location
AMCG00014281 lancl3 coding upstream 2883 7637821 ~ 7642535 (+)
AMCG00014274 nit2 coding upstream 156067 7484062 ~ 7489351 (+)
AMCG00014273 tomm70 coding upstream 189462 7445016 ~ 7455956 (+)
AMCG00014266 NA coding upstream 360183 7278122 ~ 7285235 (+)
AMCG00014267 pou1f1,LOC107688653,LOC107551978,LOC107661330 coding upstream 407856 7229073 ~ 7237562 (+)
AMCG00014283 NA coding downstream 5922 7659468 ~ 7664529 (+)
AMCG00014285 NA coding downstream 59843 7713389 ~ 7729891 (+)
AMCG00014288 NA coding downstream 130183 7783729 ~ 7795382 (+)
AMCG00014289 tspan7,tspan7b,LOC107704418,LOC107745974,LOC107593043,LOC107586946 coding downstream 192010 7845556 ~ 7855351 (+)
AMCG00014290 NA coding downstream 346544 8000090 ~ 8003278 (+)
G68904 NA non-coding upstream 19014 7625988 ~ 7626404 (+)
G68771 NA non-coding upstream 587099 7056707 ~ 7058319 (+)
G68738 NA non-coding upstream 901307 6743863 ~ 6744111 (+)
G68728 NA non-coding upstream 930597 6713171 ~ 6714821 (+)
G68698 NA non-coding upstream 1398369 6244902 ~ 6247049 (+)
G68982 NA non-coding downstream 220981 7874527 ~ 7874742 (+)
G69006 NA non-coding downstream 361198 8014744 ~ 8015003 (+)
G69023 NA non-coding downstream 479742 8133288 ~ 8136210 (+)
G69206 NA non-coding downstream 1080777 8734323 ~ 8735939 (+)
G69232 NA non-coding downstream 1237040 8890586 ~ 8890834 (+)
AMCG00014272 tbc1d23 other upstream 162858 7464503 ~ 7482560 (+)
G68848 NA other upstream 228824 7413640 ~ 7416594 (+)
G68830 NA other upstream 295951 7346195 ~ 7349467 (+)
G68475 NA other upstream 2993454 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 3513700 4127476 ~ 4131718 (+)
G69406 tgfbrap1,LOC102780916 other downstream 2349512 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 2494433 10147979 ~ 10151913 (+)
AMCG00014407 LOC107725344 other downstream 5592763 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 6001692 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 6536018 14189564 ~ 14205014 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000306_05555926_05562924 XK coding CI01000306 null 5555926 ~ 5562949 (-)