AMCG00014315


Basic Information

Item Value
gene id AMCG00014315
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 8875167 ~ 8875832 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014315
ATGCGAACTCGTCATCTGAGAGACATGGATAAAGAGAATCCACGTCTACAGATGCCTCCCCCTCGGATATACGTGGAAAGGACTCTGGCCTTGATTAAACCAGATGTCCATCACCAAGCAGACGAAATTGAGGACCTGATTCTACGAGCCGGCTTCACTGTCCTGCAGAAAAGAAAGTTACACCTCAGCCCTGAACAATGCATGGACTTCTATGCAGACCAATATGGCAAACCGGGTTTCCCCAGCTTAATTGCCTTCATGAGTTCCGACCAGATCACTGCCTTGGACCTTGCCCGAGATCAGGCCTTTGCTCACTTGAACAGTCTCATTGGACCTGCAAACAGCACGGAAGCGAAGGAAACGCACCCGGAGAGCCTAAGAGCCATCTACGGGACATCTGACCTGAGGAATGCAGTGCACGGCAGTGAGAGCTTTTCTGCAGCACAGAGGGAAATACGGTTCATGTTCCCCGGAACCATTCTTGAGCCGATCCCATCGGGTAGTGCAGCCATGGACTACCTGGGCAGAGCTGTGAACCCCACCCTGCTGAAAGGGCTGACCGAGCTCTGCAAAACAAAGCCAGCAGATCCAATCACCTGGCTAGCTGACTGGCTGACAGACAATAACCCCAATCAGCCTAGAGTGCAACATCCCAGCAATGAGTAA

Function

GO:

id name namespace
GO:0048515 spermatid differentiation biological_process
GO:0006165 nucleoside diphosphate phosphorylation biological_process
GO:0006183 GTP biosynthetic process biological_process
GO:0006228 UTP biosynthetic process biological_process
GO:0006241 CTP biosynthetic process biological_process
GO:0005524 ATP binding molecular_function
GO:0004550 nucleoside diphosphate kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014315 True 666 mRNA 0.52 1 8875167 8875832

Neighbor

gene id symbol gene type direction distance location
AMCG00014314 gabrb3,LOC107673538 coding upstream 50635 8795228 ~ 8824532 (+)
AMCG00014309 oca2,LOC107716962 coding upstream 367480 8478982 ~ 8507687 (+)
AMCG00014308 herc2,LOC102311645,LOC101466252,LOC102196790 coding upstream 473808 8386165 ~ 8401359 (+)
AMCG00014307 LOC103356925 coding upstream 492883 8343001 ~ 8382284 (+)
AMCG00014306 cyfip1 coding upstream 553428 8263436 ~ 8321739 (+)
AMCG00014313 atp10a coding downstream 68163 8943995 ~ 8972432 (+)
AMCG00014316 ube3a,LOC101472780 coding downstream 128668 9004500 ~ 9020633 (+)
AMCG00014321 NA coding downstream 214042 9089874 ~ 9130531 (+)
AMCG00014323 LOC104949108 coding downstream 261199 9137031 ~ 9144426 (+)
AMCG00014322 nme7,LOC107732015,LOC107590639,LOC107659027 coding downstream 281912 9157744 ~ 9172062 (+)
G69206 NA non-coding upstream 139228 8734323 ~ 8735939 (+)
G69023 NA non-coding upstream 738957 8133288 ~ 8136210 (+)
G69006 NA non-coding upstream 860164 8014744 ~ 8015003 (+)
G68982 NA non-coding upstream 1000425 7874527 ~ 7874742 (+)
G68904 NA non-coding upstream 1248763 7625988 ~ 7626404 (+)
G69232 NA non-coding downstream 14754 8890586 ~ 8890834 (+)
G69326 NA non-coding downstream 490705 9366537 ~ 9376350 (+)
G69384 NA non-coding downstream 1025618 9901450 ~ 9910048 (+)
G69400 NA non-coding downstream 1098592 9974424 ~ 10028351 (+)
G69428 NA non-coding downstream 1178659 10054491 ~ 10054711 (+)
AMCG00014272 tbc1d23 other upstream 1392607 7464503 ~ 7482560 (+)
G68848 NA other upstream 1458573 7413640 ~ 7416594 (+)
G68830 NA other upstream 1525700 7346195 ~ 7349467 (+)
G68475 NA other upstream 4223203 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 4743449 4127476 ~ 4131718 (+)
G69406 tgfbrap1,LOC102780916 other downstream 1127226 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 1272147 10147979 ~ 10151913 (+)
AMCG00014407 LOC107725344 other downstream 4370477 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 4779406 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 5313732 14189564 ~ 14205014 (+)

Expression


Co-expression Network