AMCG00014320


Basic Information

Item Value
gene id AMCG00014320
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 9061033 ~ 9085213 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014320
CTAAAGCTTGATTTGAAACACAAGAATGAAGCAGGAGCCCTGGACCGGTATGACCACAGCAGGAGACGTGCTGAGACAGGCGCACAGGGCAGCATGGTGGCGCAGAAGGAAACTCAGTTTGAGCCTGATGTCTGCCCCCTCATCTCCTCTCCGAAGTGGTTGAAGCTTCACGGTCTGAAAGAAAGCAGACTTGCCCTCTACCAAGTCCTCTCACAGATAGGATTCAAACACAGTGAAGATTATGTTCACTCATTGAGAAAACCAGTCTCTTCCCAGTATGCAGAAGGCCTGTTCTTACAGTTCATGAAAGATGGCAGTATTTATAATCTCACAGCCCGGAGAGACCAGCTCCAGGAGATCACTGAACGGCTGTCCAGGAAGGTCAGTCTGTACCAGCAGAGACTGGACTGGCTGACCAGTGGCAGTCGGCAGCTGTGTGGTGTGATCCAGGAGCGCTCGACCACGCTGGTCCTGAACTTTGGGACCGTGTCCAGTTCTCAGTACGACCTGAGCCGTGACGCTGTGTGTCAGGTCATCAGGGAGCAGGTGTCACAGATTGCAAGATTTAATCTGATTTGCTCCTCTCCTGACTTGAAAATGTGGCAGGAACAAGCGGTGCAGACCTCTAAAGCGAACACAGACTCTGCAGTTGAATGGATTTGGACGTTAGAACATAAACCAGCAACGTCTCAGTTCAGCACTGCTGAAGCTTTGCTGAAGGCCATGAGTGATAAAACAATTGAGGCGGTTTATCTGTTTGCTGCTGGGGactataaagaaaatgtgtccGACCTGCTGAGGAATAAGCTGGTGAATAGTGTGTGTCCCATCCACACGATATCCTTCAATGCTAAAAATGAGGAGACTGTTAAATTCCTGAAGGCTTTAGCTCATCTGACTGCTGGGAGGTTTCATGCTTTTGCTGAAATGCATGCTTCTGAGGTGGTTTCATTTGATGACGGTGAAGAGGGTGACAGGACCGAGTACTTTCCCAACATGCCAAAGAGACCTATAGGAGGGGTGCCTCCTGGGGCTGGTGTCAGGGAGGATGTCTTCTTAATCTGGAGAGAGATGGAAGAGGCCAGAAGCACCATCGCTCAAATTCAGGCTATATTACTGGagtatcctcagacagcagggTATAAAGATCCACCAGGTCTTGGAGCTCCTGAAATGCCACAATCAGAAGACAGCATGAGCTCCAAAACCTGGCTGGCAAAGTACGGTCTGAGAGCCCAGAAGCTGTCGTTCTACAATGCCCTCGCTGATTGTGCGTTTCGCCATTCGGATGGTGTCGTGGATGTGAAATCCAAACCGGCTGAAGAGAGTCTGCAAACGGACGCAGAAAAAAGACACAAGCTTGTCAATGCCAAATACTGTGACAAGTTTGCTCACACCAAATGGAAAGATGGCTCTGTGGTTCATGTGTACGTGACAGCGGAGAAGTGTAAGTGGTATGAAGACAGGATGAAGACAGCCCTTACAAACCTACAGAAGAGGCTGCAATGGCTTCAAAATGGCAGCCGGGAGCTGTTTGGAACCATTCTTGAGGATCAGGTATACGTCCTTATAGACACCTCGGAGTCCATGAAGGACCAGCTTCCAACATTGAAGCAGAAGATCTTCCAGCTAATGCAgGAACAGCTTCGTCACAAAGCCAAAGTGAACTTCGTCAAGTTTGACTCACGCGTGGCAGCTTGGCGTGACAGACTGGCTGAAGTGAACGAGCAGAATTTGGAGAATGCGTGGTATTGGGTCAAAGGCCTTCAGGTGGGGGGCTCAACAAACACTCTGGGTGCTTTGAGACTGGCGATAGCAGATGTTGGTACTCACGCTGTCTACCTCCTAACAGATGGAAGACCAGATCAGCCTCTGAAGACAGTCCTGGCCCAGGTACAGCTACAACCCCCAGTTCCTATTCACACCATCTCCTTCAACTGTGATGACCTGGAGGCCAACACTTTCCTGTATGAGCTGTCCAGAGAGACTGGGGGCCGATACCACTGCTACTGTTGTGACATTAGTGAGCCCGGGGCACCTCCACCCTTTGTGAGTGAAGATATCCACCTACTGAAGATGGAAATTGAACAAGGAGAGAAGGACTTGGAGAAAGTGCTAAAGCTCCGTGCCGAGTGTGTCATGTTGGACTGGTATCACAACGGAGAAAATCAGATGGTTAAAAGGGGGCATGAGAAAGCGCAAAATTCCTCGAAGCTGCAGCCCGGGTGTCAGGATGTGACAGCAGCTCCGAGGCCTCAATCAGCTGTAGAGCGGACTGTAGCCTCCCATCGCAACCACCGACAGCAGcttcacacccacacacccgaGCCGCCCAAACCACACAGCCTGCACACACAAAAGATACGTCATGCAGcACATACAAAAGCCAGTCTGCTCAGACTGCAGAGCAATGGTGTAGACATCAGTGACAAAGACAGTGGTCTCAAAGAATGGATGCTCCCAGAAACATTGTCTGTGTTCAAAAGGAACATCGATAAGAAAACCTGTGTTCTCAACGCTCGCTGGCTTAAAGTAAACGGTCTGGTTGCGAGGAGACTGACCTTGGTTGATGCCCTGGCACCTACAGCTATACCACAGACGGCCAAATATGTTCCAATACTGGACAAACACGTTTATTCTAAAGTGTTTGATGAGGTGCTGCCCTTGGCTCACGTCAGCAACAGTAAGCGGCATCTCACCCTCATCAATCCTCAAGCCGTGAATCTGGACGCCTATAGGAAGAAACTTGAACATGCTCTGAAATCCTACAAAAGGCGGCTCAATTTGATTGTATGGAGAGCACTGAGCCAAGAAGAAAGGGATAaGTTTGGCAGTGAGAAGCCTCTGCCATTCGGAGAGCACAAGGAGGCCCTGCTGCAGGCCCTGGACCGGCTGGGGTGGCCCGTAGCGCAGGAGGACGTGTCTCTGCTGGAGGACGAGATTGACAACGCACAGTCCTTCCTGCAACAGGCCGAAGACCTGCAAAAGGCCGTGGGGAAAGGCAAGGACCAGGGCAAGGGCAGCAGACCTGGCAGTTCTCAAGATGGACACACAGAAGAAACAAAGGATGAAAAGAGAAATGCTTCTAAGAAACGCAAGGCACTGGACTCTCTCAGAGGTCAGAAAGTCATTGCAAGGTCAGACATTGATGGCTTTTATTATCCTGgTACGGTGTCAAAATGCCTCAACTCCAAAAGAGCCATTGTAGATTTCAGCCACGGAGACACTCAGATTGTTCCTGTGGGTTTTTTGATACCTGTCGGAGGAAGTGGCCCTTGTCCTCCGCTTGCAGTCGgggattttgtgtttgttggatGTGGGACAGGAGACGCAAGTGATTGCTTTGTCCCTGGAGTTGTCATAGCAACCCCTCGCAGAGTGGAGGCCGCAGACAAATTGTACACGATACTGAAatacaacaacagaaaagtgAGTAAGATTCAGCCATCATCACATAGCACATCATTCAAAGGGGTCATTGTGTTCGTGTTAAGGACAGTTGAACTCCATAAAATAGTTGTCCTCCTTCTG

Function

GO: NA

KEGG:

id description
K24509 VWA3; von Willebrand factor A domain-containing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014320 True 3531 mRNA 0.50 23 9061033 9085213

Neighbor

gene id symbol gene type direction distance location
AMCG00014319 NA coding downstream 10391 9047304 ~ 9050642 (-)
AMCG00014317 cnga3a,LOC108441138 coding downstream 20988 9030105 ~ 9040045 (-)
AMCG00014311 NA coding downstream 302852 8731578 ~ 8758181 (-)
AMCG00014310 gabrg3,LOC107711006 coding downstream 446032 8601162 ~ 8615001 (-)
AMCG00014312 NA coding downstream 521984 8536937 ~ 8539049 (-)
AMCG00014318 NA coding upstream 46202 9131415 ~ 9135387 (-)
AMCG00014326 NA coding upstream 59325 9144538 ~ 9147337 (-)
AMCG00014325 NA coding upstream 131656 9216869 ~ 9228627 (-)
AMCG00014331 NA coding upstream 273634 9358847 ~ 9367036 (-)
AMCG00014333 inpp4a coding upstream 288243 9373456 ~ 9418236 (-)
G69250 NA non-coding downstream 62407 8998426 ~ 8998626 (-)
G69233 NA non-coding downstream 170194 8890556 ~ 8890839 (-)
G69086 NA non-coding downstream 810472 8226494 ~ 8250561 (-)
G68981 NA non-coding downstream 1186675 7874153 ~ 7874358 (-)
G68905 NA non-coding downstream 1434658 7625985 ~ 7626375 (-)
G69352 dcaf6 non-coding upstream 264575 9349788 ~ 9355238 (-)
G69372 NA non-coding upstream 504611 9589824 ~ 9590081 (-)
G69373 NA non-coding upstream 505963 9591176 ~ 9591381 (-)
G69382 NA non-coding upstream 809513 9894726 ~ 9895580 (-)
G69391 NA non-coding upstream 816144 9901357 ~ 9912021 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other downstream 676809 8383285 ~ 8384224 (-)
AMCG00014298 NA other downstream 902443 8155932 ~ 8158590 (-)
AMCG00014297 NA other downstream 921907 8134903 ~ 8139126 (-)
AMCG00014278 NA other downstream 1637742 7413729 ~ 7423291 (-)
AMCG00014276 LOC106575771,LOC106574874,LOC107705522,LOC107584803,LOC105911816,LOC105019730 other downstream 1649143 7402152 ~ 7411890 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other upstream 220026 9305239 ~ 9317167 (-)
AMCG00014340 NA other upstream 915921 10001134 ~ 10017751 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other upstream 972884 10058097 ~ 10061230 (-)
G69537 NA other upstream 1711503 10796716 ~ 10798147 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 2039816 11125029 ~ 11137086 (-)

Expression


Co-expression Network