Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014322 |
| gene name | nme7,LOC107732015,LOC107590639,LOC107659027 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 9157744 ~ 9172062 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| nme7 | Predicted to enable ATP binding activity; metal ion binding activity; and nucleoside diphosphate kinase activity. Predicted to act upstream of or within nucleotide metabolic process. Predicted to be active in centrosome. Is expressed in several structures, including digestive system; eye; female organism; gonad; and male organism. Orthologous to human NME7 (NME/NM23 family member 7). |
| description |
|---|
| PREDICTED: nucleoside diphosphate kinase 7 isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0006165 | nucleoside diphosphate phosphorylation | biological_process |
| GO:0006183 | GTP biosynthetic process | biological_process |
| GO:0006228 | UTP biosynthetic process | biological_process |
| GO:0006241 | CTP biosynthetic process | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004550 | nucleoside diphosphate kinase activity | molecular_function |
| id | description |
|---|---|
| K00940 | ndk, NME; nucleoside-diphosphate kinase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014322 | True | 750 | mRNA | 0.51 | 6 | 9157744 | 9172062 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014323 | LOC104949108 | coding | upstream | 13318 | 9137031 ~ 9144426 (+) |
| AMCG00014321 | NA | coding | upstream | 27213 | 9089874 ~ 9130531 (+) |
| AMCG00014316 | ube3a,LOC101472780 | coding | upstream | 137111 | 9004500 ~ 9020633 (+) |
| AMCG00014313 | atp10a | coding | upstream | 185312 | 8943995 ~ 8972432 (+) |
| AMCG00014315 | NA | coding | upstream | 281912 | 8875167 ~ 8875832 (+) |
| AMCG00014324 | NA | coding | downstream | 87232 | 9259294 ~ 9273055 (+) |
| AMCG00014327 | dcaf6 | coding | downstream | 156628 | 9328690 ~ 9361176 (+) |
| AMCG00014329 | NA | coding | downstream | 271137 | 9443199 ~ 9458087 (+) |
| AMCG00014330 | NA | coding | downstream | 303347 | 9475409 ~ 9482055 (+) |
| AMCG00014336 | NA | coding | downstream | 631895 | 9803957 ~ 9808880 (+) |
| G69232 | NA | non-coding | upstream | 266910 | 8890586 ~ 8890834 (+) |
| G69206 | NA | non-coding | upstream | 421805 | 8734323 ~ 8735939 (+) |
| G69023 | NA | non-coding | upstream | 1021534 | 8133288 ~ 8136210 (+) |
| G69006 | NA | non-coding | upstream | 1142741 | 8014744 ~ 8015003 (+) |
| G68982 | NA | non-coding | upstream | 1283002 | 7874527 ~ 7874742 (+) |
| G69326 | NA | non-coding | downstream | 194475 | 9366537 ~ 9376350 (+) |
| G69384 | NA | non-coding | downstream | 729388 | 9901450 ~ 9910048 (+) |
| G69400 | NA | non-coding | downstream | 802362 | 9974424 ~ 10028351 (+) |
| G69428 | NA | non-coding | downstream | 882429 | 10054491 ~ 10054711 (+) |
| G69431 | NA | non-coding | downstream | 883315 | 10055377 ~ 10055733 (+) |
| AMCG00014272 | tbc1d23 | other | upstream | 1675184 | 7464503 ~ 7482560 (+) |
| G68848 | NA | other | upstream | 1741150 | 7413640 ~ 7416594 (+) |
| G68830 | NA | other | upstream | 1808277 | 7346195 ~ 7349467 (+) |
| G68475 | NA | other | upstream | 4505780 | 4649200 ~ 4651964 (+) |
| AMCG00014196 | NA | other | upstream | 5026026 | 4127476 ~ 4131718 (+) |
| G69406 | tgfbrap1,LOC102780916 | other | downstream | 830996 | 10003058 ~ 10008648 (+) |
| AMCG00014345 | NA | other | downstream | 975917 | 10147979 ~ 10151913 (+) |
| AMCG00014407 | LOC107725344 | other | downstream | 4074247 | 13246309 ~ 13251732 (+) |
| AMCG00014423 | pou2f1b,LOC107748141 | other | downstream | 4483176 | 13655238 ~ 13689188 (+) |
| AMCG00014456 | NA | other | downstream | 5017502 | 14189564 ~ 14205014 (+) |
