AMCG00014329


Basic Information

Item Value
gene id AMCG00014329
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 9443199 ~ 9458087 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014329
ATGACTTCCCTGGCTTTCTGGATTGTCTTGTTGTCTCAAATCCATGGATCCTGTGCAGAAGTTGGCAAAATGTCTACAATACCCAAACATCCACAAACGCAGTCGACAAATGAAGTCCAGGCCTTCCCTGATGAGGAGAAAAATAACCTTCCAGTTTTCACCATGAACTACCCACGCATACAGGTGCCATTAGAAATAACGCTGTGGGTGCTTTTAGCGTCCTTTGCGAAAATTgGTTTCCATGTTTACCACAAGATAACCATATGGATCCCGGAGTCCTGTCTTTTGATTTCCATTGGATTAATTGTAGGAGGAATCATGTACTCTGTGAAGGAAGTGCCTCCAGCTGTGCTGAGCTCGAATGCCTTTTTCCTGTACATGCTGCCCCCCATTGTACTTGATTCGGGCTATTTTATGCCCACCCGACCCTTCTTCCAGAACATTGGCACAGTGTTGTGGTTTGCTGTGATTGGCACCCTGTGGAACTCCATCGGAATCGGAATCTCCCTTTATGCCATCTGTCAGATTGAGGCCTTTGGTATCCAGGACATTAACCTGCAGGAGAATCTGCTCTTTGGCGCTATTATCTCAGCGGTGGACCCCGTGGCAGTGCTGACAGTGTTCGAAGATATTAACGTGAATGAGCAGCTTTATATCGTGGTATTTGGGGAGTGTCTCTTCAATGATGCTGTCACTGTGGCATTATACAACATGTTGACTTTTGTGGCAGAAATGCCTGAAGTGGAATCCATTGATGTCTTCCTTGGCTTTGGAAGGTTTTTCATTGTCGGCTTAGGAGGGGTGCTCTTTGGGTTTCTGTTCGGGTTCGTGGCAGCGTTTACCACCCGGTTCACCACAAATGTCAAAGAAATCGAGCCTCTCTTTGTCTTCATCATTGTAACGTGTGCAGTGACCATGAAGTACTATGTAGAGGAGAACGTGTCTCAGAGGTCCTGTTCGACTGTCAGGCATGTCATCAAGATGTTTGGCACTGTCTCCGAGACCCTCATCTTCTTCTTCCTGGGAGTTGTGACCATTACAAGTGATCACGAATGGAACTGGGCTTACATTTGCTTCACcatcttcttctgcttcttttgGCGAGGCATAGGTGTCCTTGTCTTAACACAGATTATCAACCCTTTTCGCACCATACCCTTTAACTTCAAAGATCAGTTTGGCTTGGCGTATGGTGGTCTTCGGGGCGCTGTGTGCTTCGCTCTGGTCTTTTTGTTGCCTCACAGTATTGGACGAAGGAATTTGTTTCTCACTGCCACCATTGCCGTGATCTTATTTACTGTCTTCATTCAGgGTATAACCATTCGGCCTTTGATTGAGTACATGAATGTCAGGAGGACAAACAGGAAACTAAATACTATTAATTTTGAAATCCACAGTCGGGTCATGGAGCACACAATAGTGGGTATTGAAGACCTGTGTGGGCAGTGGAGCCATTACTACTGGAAAGACAAGTTTAAACGATTTAATGACAGATTTCTTAGGAAAATTCTCATCAGGGAGAACAAGGCCGAGTCCAGTATTGTTGCTCTGTACAAGAAGCTAGAACTGCAGAATGCGATGGAGCTTCTCGATACAACTGGAGACATTAGTGCTGCTCCTTCTATGACTTCTCTACAGGACCCTAAACCTCCCAAACCAAAGACATTCTTACCGGACGAGCTGAGGAAAATGCATGAACTGTTGTccaaaaatatgtacaaaattcATGAAAGGACCAttgcatacacaaacaaacgTGCGCTGCCCGACGACTCAAAGACTAAAGAAATTCTTATCCGTCGCCATCTCAGCCTTAGAAGAAGCAGCAACGCAGAATCGGAGATAGACTATCCTTCTGCCAGACCCACCGCGCTGCCGAGAAGGGTGCAGCCGGGCAGGACATTGTCCCATGCAGGTGCCATGATGCCGCTCCGAAGACTGGACACTTTGACGGAGGCGGCTGACTACAGCTCGTCATCACAAGTGGAAGTTATAAATGAGGGAGGAAGTCGGAGGAACAAGGGTGCCTACAGACAGGGGTCAAGCGTGAGTGATTCTATGGTGCATGTGCCAAGATGGCGGTTCGGCCCTCCTGCAGACAGAGCCTCCAATGCCAATGAAGACCAGGAAGAAGAGGACCCTCGGCCTCCAGCAGGCTGGACACCAGAGCCTCACAGCCGTCGGGACAGAGGGGCCGACAACCCCTTGCTGAGAAGACCCAGGGACCCTTACAATCATTGA

Function

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0006814 sodium ion transport biological_process
GO:0015299 solute molecular_function

KEGG:

id description
K14722 SLC9A2, NHE2; solute carrier family 9 (sodium/hydrogen exchanger), member 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014329 True 2241 mRNA 0.48 11 9443199 9458087

Neighbor

gene id symbol gene type direction distance location
AMCG00014327 dcaf6 coding upstream 82023 9328690 ~ 9361176 (+)
AMCG00014324 NA coding upstream 170144 9259294 ~ 9273055 (+)
AMCG00014322 nme7,LOC107732015,LOC107590639,LOC107659027 coding upstream 271137 9157744 ~ 9172062 (+)
AMCG00014323 LOC104949108 coding upstream 298773 9137031 ~ 9144426 (+)
AMCG00014321 NA coding upstream 312668 9089874 ~ 9130531 (+)
AMCG00014330 NA coding downstream 17322 9475409 ~ 9482055 (+)
AMCG00014336 NA coding downstream 345870 9803957 ~ 9808880 (+)
AMCG00014337 NA coding downstream 382936 9841023 ~ 9908262 (+)
AMCG00014334 LOC107748535,LOC108247996,LOC104928562,LOC103473625 coding downstream 456038 9914125 ~ 9916789 (+)
AMCG00014335 NA coding downstream 501146 9959233 ~ 9981593 (+)
G69326 NA non-coding upstream 66849 9366537 ~ 9376350 (+)
G69232 NA non-coding upstream 552365 8890586 ~ 8890834 (+)
G69206 NA non-coding upstream 707260 8734323 ~ 8735939 (+)
G69023 NA non-coding upstream 1306989 8133288 ~ 8136210 (+)
G69006 NA non-coding upstream 1428196 8014744 ~ 8015003 (+)
G69384 NA non-coding downstream 443363 9901450 ~ 9910048 (+)
G69400 NA non-coding downstream 516337 9974424 ~ 10028351 (+)
G69428 NA non-coding downstream 596404 10054491 ~ 10054711 (+)
G69431 NA non-coding downstream 597290 10055377 ~ 10055733 (+)
G69457 NA non-coding downstream 765584 10223671 ~ 10224035 (+)
AMCG00014272 tbc1d23 other upstream 1960639 7464503 ~ 7482560 (+)
G68848 NA other upstream 2026605 7413640 ~ 7416594 (+)
G68830 NA other upstream 2093732 7346195 ~ 7349467 (+)
G68475 NA other upstream 4791235 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 5311481 4127476 ~ 4131718 (+)
G69406 tgfbrap1,LOC102780916 other downstream 544971 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 689892 10147979 ~ 10151913 (+)
AMCG00014407 LOC107725344 other downstream 3788222 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 4197151 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 4731477 14189564 ~ 14205014 (+)

Expression


Co-expression Network