AMCG00014330


Basic Information

Item Value
gene id AMCG00014330
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 9475409 ~ 9482055 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014330
CAAAAATAGATGGACAGTTCCATTTGGCAGTTCAATGTGTTTGGAGAGACCAGCACACGAAAGCCAACTGTGACAAGAACTCAGAACTCCTTCCAGCTGAAGACAGAAAGCAGTGCAGGGCAAAGCCAACAGATATGAAGCTTAGTGTTGCATTGTTCTTTGCGGGGTTTTTTGGAGCTCTGGGAACCGTGTTTTTCTTGGTGTCATTTGGGACGGATTACTGGCTCTTGGTGTCTGAAACTTGTTCACCTAATGAGACAGCAAGCAAAACAGTAACTGAGcgTGGAGATGGGGTATTGTCACAAAAGGACACTGATACGACCTTTTACCACGAGGGCCTCTTTTGGAGATGCACTTTTGGTGGAAAAATGGGAGAGGACAGCATGTGGAAGTTCTGGTTCAcCAACCAGCCACCATCAAAGGTCTGCTCACATGCCTATCTCTTTCCATTCCCAACTTCAGCAGAGACTAACAATTCCACGGCCTATTCTCCTGTCAtctaCCGAGGGTTTTGGAGTATCTTCATGCTTATCGGAGTGGCCGCTGTAGTCATAGGTGGATTCGTCATCATCTGTGCTGCTCCATTTGCCAGCCATAAGCTTTATAAAGCAGGTGGAGGGCTATTCTTAACCTCTGGGCTGTTCTTCCTTGCAGTCATCGTCATGTATGTCATCTGGGTCCATGTCTTAGATGGGCTGACTGAGTACACCATTCAAAAGCAGTCCCAGTGTAAAGACTTCACCGTCAACGTCAGATATGGCTTGTCCTTCATGTTTGCACCTGTGGGAGTCTTCTTTTGTCTGCTGGCTGGCTTGCTCTTCCTTTTAATAGGACGTACAGTGCAGTTGcattacaattaaacacaaaggcCATCGAGCAACGTGCACATTGGAACAGAGACTGGATGTTTTATGCTTGccaaaaaaaatgtgcatataaAATCAACATCATGGATATACGACAGGAGAATGATCATCAGATAGTTGTAGCGATACATGTACAGGTCCCAACTGAGTATTGTGAGTTagttcaaaacacaaatgtttattagTTTCAATATTGAATGTTCATTCATACCTATGTTccattaaaattacttttttgtctGATGTTGATACACACAGCACTTTTATAGCATGAAATTGAAGCATAACTGTTAATCTAAGGATGATACACCAGTTTTTTTGCTCTAACCAAATGGTtattttcagtcagtcagttgtgCTGTTGCTCCCTGATACAGtagaatatactgtatattaagtATATTATGTTTAGTCGTATTTAATTCATAACATAGCATAGCATTATTAGTTTGATTTACACAGAGCACTTGTGCTCTAACAATATTTTTAGTAGGTTTGTCACTTTCAGATACATTTCAGTCTTTCCTCTTAGTGTTCTGGGTTTGGGTGGGATTTGCAATGAAATTACATCATTTTACCAGGTGGATCCACTATAATCTTGATCGTTTTAGCATCCCAGTGCATTAACCCTTGGGCTGCCAGTGACTTGCCCATATATGTGAGTGCTGCTGTttgaatgcaattattttttaatgtttcttatttgtgtttagtttggcttcattttaatttaaaatcagtttcagaaaattacattacattattatgaattatgaatgatttcaattaattgtataatgtaCAACTGCAATACACAGTGCCTTCTTTGAAGAAGGATATATAGGATGAAGAACCAAagacaatttgtttttcaattgacACAGAGgaaattatgaaatgtatattttatgctttgtagtttttatttttatttggcaaTAAATGCCAACCAGCCtgtggtttaaataaatacaattccataattaacaaacatacagtgctttaagaaaatgtagttatgttatattataatattataataattattattttttgtaatttaattattcagttTGCTGTATAGTAAATTGTACAAATAGGATCAGGtcctggaaaaaaatgtttttttccttttctgtataAAGAATTGTAATGCTTCTGTATTAAaaccatcatttaaaaataggatttgataaacaaatactgtaagcttattttctatttgtgtattACTGATAGTTTaggtatatattgttttccacaTTGATTTTGTAGCAATTCAAGATCAATTTTAACGTTTAAATATGCATGGCTGTACAGTTaaagcaataaagaaaaaaataaagtatacatgtacatacctattttgcagttttacatTTCCAGTTTGAGGTAGTAGATTTAAACATTGTTCAGTGTTTTGCCTTTCACattgaaaatgcttttcttaaGGTACATGGGAAAAGATATATATGTAACCTCttatgttaattatatatatatatatatgtatatgtatgtatgtgtgtgttttgagtagactttattaaatattgacagTGCTGACTACTTACCTACAGTATTTGGTTAAGATATTCATCTACAGAGGTACggtaaatggaaaaatatttctAAAGCCTTCTAAAAGTTAAACTTCATTTCTTAATTTGGCTGAAATATAGACAGTGGGTAAATGGTAATCCATTTAATGTAACAATCTCAGAGATATATAAGGGATTTAGGATGTTTGATAATTGCCTAATTTAAGgttatagttttttgttttcatattctaTGTCGCTTTGTAAATTTGCTCATTTTTGgaaaggttagaaataatgattctGAATAATATAATGGTCTCTGGGGAAAAATTAAGGCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014330 True 2750 mRNA 0.35 5 9475409 9482055

Neighbor

gene id symbol gene type direction distance location
AMCG00014329 NA coding upstream 17322 9443199 ~ 9458087 (+)
AMCG00014327 dcaf6 coding upstream 114233 9328690 ~ 9361176 (+)
AMCG00014324 NA coding upstream 202354 9259294 ~ 9273055 (+)
AMCG00014322 nme7,LOC107732015,LOC107590639,LOC107659027 coding upstream 303347 9157744 ~ 9172062 (+)
AMCG00014323 LOC104949108 coding upstream 330983 9137031 ~ 9144426 (+)
AMCG00014336 NA coding downstream 321902 9803957 ~ 9808880 (+)
AMCG00014337 NA coding downstream 358968 9841023 ~ 9908262 (+)
AMCG00014334 LOC107748535,LOC108247996,LOC104928562,LOC103473625 coding downstream 432070 9914125 ~ 9916789 (+)
AMCG00014335 NA coding downstream 477178 9959233 ~ 9981593 (+)
AMCG00014338 gpr45,si:dkeyp-118h3.5,LOC106581986,LOC107602888,LOC107688775 coding downstream 511618 9993673 ~ 9994671 (+)
G69326 NA non-coding upstream 99059 9366537 ~ 9376350 (+)
G69232 NA non-coding upstream 584575 8890586 ~ 8890834 (+)
G69206 NA non-coding upstream 739470 8734323 ~ 8735939 (+)
G69023 NA non-coding upstream 1339199 8133288 ~ 8136210 (+)
G69006 NA non-coding upstream 1460406 8014744 ~ 8015003 (+)
G69384 NA non-coding downstream 419395 9901450 ~ 9910048 (+)
G69400 NA non-coding downstream 492369 9974424 ~ 10028351 (+)
G69428 NA non-coding downstream 572436 10054491 ~ 10054711 (+)
G69431 NA non-coding downstream 573322 10055377 ~ 10055733 (+)
G69457 NA non-coding downstream 741616 10223671 ~ 10224035 (+)
AMCG00014272 tbc1d23 other upstream 1992849 7464503 ~ 7482560 (+)
G68848 NA other upstream 2058815 7413640 ~ 7416594 (+)
G68830 NA other upstream 2125942 7346195 ~ 7349467 (+)
G68475 NA other upstream 4823445 4649200 ~ 4651964 (+)
AMCG00014196 NA other upstream 5343691 4127476 ~ 4131718 (+)
G69406 tgfbrap1,LOC102780916 other downstream 521003 10003058 ~ 10008648 (+)
AMCG00014345 NA other downstream 665924 10147979 ~ 10151913 (+)
AMCG00014407 LOC107725344 other downstream 3764254 13246309 ~ 13251732 (+)
AMCG00014423 pou2f1b,LOC107748141 other downstream 4173183 13655238 ~ 13689188 (+)
AMCG00014456 NA other downstream 4707509 14189564 ~ 14205014 (+)

Expression


Co-expression Network