Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00014343 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 10015503 ~ 10071601 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K15432 | ASW; ashwin |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00014343 | True | 711 | mRNA | 0.54 | 4 | 10015503 | 10071601 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014338 | gpr45,si:dkeyp-118h3.5,LOC106581986,LOC107602888,LOC107688775 | coding | upstream | 20832 | 9993673 ~ 9994671 (+) |
| AMCG00014335 | NA | coding | upstream | 33910 | 9959233 ~ 9981593 (+) |
| AMCG00014334 | LOC107748535,LOC108247996,LOC104928562,LOC103473625 | coding | upstream | 98714 | 9914125 ~ 9916789 (+) |
| AMCG00014337 | NA | coding | upstream | 107241 | 9841023 ~ 9908262 (+) |
| AMCG00014336 | NA | coding | upstream | 206623 | 9803957 ~ 9808880 (+) |
| AMCG00014342 | nck2b | coding | downstream | 53553 | 10125154 ~ 10145702 (+) |
| AMCG00014344 | NA | coding | downstream | 84864 | 10156465 ~ 10162165 (+) |
| AMCG00014352 | NA | coding | downstream | 157399 | 10229000 ~ 10242261 (+) |
| AMCG00014351 | LOC107688773,LOC102224404,LOC106959393,LOC103459619,LOC108266990,LOC107099852 | coding | downstream | 236821 | 10308422 ~ 10318002 (+) |
| AMCG00014350 | NA | coding | downstream | 281244 | 10352845 ~ 10380421 (+) |
| G69384 | NA | non-coding | upstream | 105455 | 9901450 ~ 9910048 (+) |
| G69326 | NA | non-coding | upstream | 639153 | 9366537 ~ 9376350 (+) |
| G69232 | NA | non-coding | upstream | 1124669 | 8890586 ~ 8890834 (+) |
| G69206 | NA | non-coding | upstream | 1279564 | 8734323 ~ 8735939 (+) |
| G69023 | NA | non-coding | upstream | 1879293 | 8133288 ~ 8136210 (+) |
| G69457 | NA | non-coding | downstream | 152070 | 10223671 ~ 10224035 (+) |
| G69499 | NA | non-coding | downstream | 421546 | 10493147 ~ 10493396 (+) |
| G69540 | NA | non-coding | downstream | 765603 | 10837204 ~ 10838230 (+) |
| G69556 | NA | non-coding | downstream | 887725 | 10959326 ~ 10961929 (+) |
| G69610 | NA | non-coding | downstream | 1149469 | 11221070 ~ 11221274 (+) |
| G69406 | tgfbrap1,LOC102780916 | other | upstream | 6855 | 10003058 ~ 10008648 (+) |
| AMCG00014272 | tbc1d23 | other | upstream | 2532943 | 7464503 ~ 7482560 (+) |
| G68848 | NA | other | upstream | 2598909 | 7413640 ~ 7416594 (+) |
| G68830 | NA | other | upstream | 2666036 | 7346195 ~ 7349467 (+) |
| G68475 | NA | other | upstream | 5363539 | 4649200 ~ 4651964 (+) |
| AMCG00014345 | NA | other | downstream | 76378 | 10147979 ~ 10151913 (+) |
| AMCG00014407 | LOC107725344 | other | downstream | 3174708 | 13246309 ~ 13251732 (+) |
| AMCG00014423 | pou2f1b,LOC107748141 | other | downstream | 3583637 | 13655238 ~ 13689188 (+) |
| AMCG00014456 | NA | other | downstream | 4117963 | 14189564 ~ 14205014 (+) |
| AMCG00014461 | NA | other | downstream | 4230846 | 14302447 ~ 14356868 (+) |
