AMCG00014349


Basic Information

Item Value
gene id AMCG00014349
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 10300003 ~ 10301361 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014349
ATGGCGCAAGCACCTGTAACCCTGGTAGGCggaaatttcaattttaaaagaaaatcagatgGCACTCTGGATAAAAGTAAAGTTGTGTCCTTACACTGCAATGATGAACTGGCCTACCATCGAAGTTCATCGAGTTTGAAATACCATTTAAGTGCAAAACACACCACAGTTTCTACTAGCAAACCGACGAGAAGTATGCAACAACCCACACTGGATCAGTGTATATGGCTACGGGGTGTGAGTAGTCAAACTTCAGCTAGGCTTACTACTGCCGTAGCAAAGTGGATTGCCAAGGACTGTTGTCCAATCAACATCGTTGCAGACCAGGGCCTGAAAGAAGTGATCAGGATTGCCACTTCCGACCCTTCGTTCGAGTTACCGTCAAGATCAACAATCATGTCCAGGATCCACGAACTGTACATTAACGAAAAGAAATGCAAAGCGAAGCTGCTATCACAAACAGTGAGTGTTGCATTGACTGGGGACCACTGGACATTGGTACAACTGCACATCTCATCGACAGAGACATTGCATTCATTTGCATTAACTGTGCTGAAAACCGAAGAAAGGCATTTTGCTGATGCCTGCGCTGAACAGTTCATGAAAGTGGCGAAGGAGTGGGAGATAGAGAGCAGGATCACTACTCTTAGTACGGACAGCGCGAGAAACATGATTGCTGCATCTAGGTTGCTTCCTTTCGAGCACATGCCTTGTATAGCACACAGTATACACAGGGTGATCGTCACGGCTCTTCGTGAAGGCGGCTTTGATGGCGTTTTAGTGAAATGTCGTAAATTAGTCAGACATTGCAAGCATAGCCCCTCTAATGTGACAGAGCTGAAAGCACAGCAAGTTGCTCATGGCCTGGGCGACGAGTCGCTAGTGCAAGATGTTCCCACAAGGTGGCATTCCACCCTCGAGATGGTTAGCCGGCTATTACGCAACAAAGACCCCCTGATGGCAACATTGGCGCAGCAAAACCACAAGCTATCCATTCCAACATCTGCAGAGTTTGATAAACTTGCCAGGCTGGAGAAACTACTGGAACCCTGCAGATATGTCATGGAACTTCTTGGGGGTGAAAAAtatgtttcctgttctgttGTGCTACCTGCACTTTGCCACTTGTCCCAGAAGATGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014349 True 1143 mRNA 0.47 3 10300003 10301361

Neighbor

gene id symbol gene type direction distance location
AMCG00014348 NA coding downstream 43628 10241006 ~ 10256375 (-)
AMCG00014346 uxs1,LOC107721615,LOC107551074,LOC107676432 coding downstream 102252 10192629 ~ 10197751 (-)
AMCG00014341 fhl2,fhl2a,LOC107716797,LOC107676452,LOC107688730 coding downstream 256437 10027652 ~ 10043566 (-)
AMCG00014332 NA coding downstream 827744 9467324 ~ 9472259 (-)
AMCG00014333 inpp4a coding downstream 881767 9373456 ~ 9418236 (-)
AMCG00014347 NA coding upstream 16883 10318244 ~ 10328231 (-)
AMCG00014354 NA coding upstream 224252 10525613 ~ 10526969 (-)
AMCG00014353 NA coding upstream 350918 10652279 ~ 10708018 (-)
AMCG00014358 NA coding upstream 598647 10900008 ~ 10903196 (-)
AMCG00014359 col4a1,LOC107715912,LOC107557928 coding upstream 659888 10961249 ~ 10974117 (-)
G69427 NA non-coding downstream 245728 10053737 ~ 10054275 (-)
G69396 NA non-coding downstream 364605 9935175 ~ 9935398 (-)
G69394 NA non-coding downstream 382668 9916845 ~ 9917335 (-)
G69391 NA non-coding downstream 387982 9901357 ~ 9912021 (-)
G69382 NA non-coding downstream 404423 9894726 ~ 9895580 (-)
G69483 NA non-coding upstream 36526 10337887 ~ 10340946 (-)
G69495 NA non-coding upstream 118819 10420180 ~ 10479009 (-)
G69523 NA non-coding upstream 379709 10681070 ~ 10681292 (-)
G69528 NA non-coding upstream 438055 10739416 ~ 10739930 (-)
G69530 NA non-coding upstream 465239 10766600 ~ 10768258 (-)
AMCG00014339 dph3,LOC105022091,LOC106574460 other downstream 238773 10058097 ~ 10061230 (-)
AMCG00014340 NA other downstream 282252 10001134 ~ 10017751 (-)
AMCG00014328 mpc2,LOC107673680,LOC107695492 other downstream 982836 9305239 ~ 9317167 (-)
G69156 LOC107673457,LOC105895139,LOC107711008,LOC106521848,LOC107716961,LOC101064050,LOC103356925 other downstream 1915779 8383285 ~ 8384224 (-)
AMCG00014298 NA other downstream 2141413 8155932 ~ 8158590 (-)
G69537 NA other upstream 495355 10796716 ~ 10798147 (-)
AMCG00014365 ube2al,ube2a,LOC105016494,LOC107552373,LOC103021436,LOC103029486,LOC108259060,LOC105934920 other upstream 823668 11125029 ~ 11137086 (-)
AMCG00014374 NA other upstream 1358650 11660011 ~ 11667537 (-)
AMCG00014412 LOC106574775,LOC107704546 other upstream 2786247 13087608 ~ 13133751 (-)
AMCG00014539 wdr3,LOC107569352,LOC107658238,LOC107712260,LOC107724477,LOC107668854 other upstream 6420712 16722073 ~ 16737877 (-)

Expression


Co-expression Network